Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400064018 | Potato | plasma membrane | 95.27 | 94.93 |
| Bra030789.1-P | Field mustard | endoplasmic reticulum, golgi | 72.73 | 71.17 |
| CDY31075 | Canola | endoplasmic reticulum, golgi, plasma membrane | 72.36 | 70.82 |
| CDY20685 | Canola | endoplasmic reticulum, golgi, plasma membrane | 72.0 | 70.46 |
| VIT_12s0035g01340.t01 | Wine grape | golgi | 72.73 | 70.42 |
| AT1G09610.1 | Thale cress | endoplasmic reticulum, golgi | 72.0 | 70.21 |
| VIT_12s0035g01170.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 71.27 | 67.59 |
| KRH06044 | Soybean | endoplasmic reticulum, golgi, vacuole | 67.64 | 66.43 |
| KRH50678 | Soybean | cytosol | 15.64 | 60.56 |
| GSMUA_Achr8P29140_001 | Banana | endoplasmic reticulum, golgi | 58.55 | 57.71 |
| Solyc11g031950.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 60.36 | 56.46 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 49.45 | 53.97 |
| Solyc06g064800.1.1 | Tomato | extracellular, golgi | 51.27 | 53.41 |
| TraesCS5D01G319700.1 | Wheat | mitochondrion | 53.45 | 49.33 |
| TraesCS5A01G313000.1 | Wheat | mitochondrion | 53.45 | 49.16 |
| HORVU5Hr1G080580.1 | Barley | endoplasmic reticulum, mitochondrion, plastid | 53.45 | 49.0 |
| TraesCS5B01G313900.1 | Wheat | golgi, unclear | 53.45 | 49.0 |
| TraesCS7A01G560100.1 | Wheat | mitochondrion, plastid | 52.36 | 47.68 |
| Os12t0204500-01 | Rice | endoplasmic reticulum, golgi | 50.55 | 47.12 |
| TraesCS7D01G549800.1 | Wheat | mitochondrion, plastid | 52.0 | 46.73 |
| TraesCS7B01G485000.1 | Wheat | mitochondrion, plastid | 50.91 | 46.51 |
| EES16857 | Sorghum | mitochondrion | 50.91 | 46.2 |
| Solyc11g020540.1.1 | Tomato | cytosol | 10.91 | 44.78 |
| KRH50677 | Soybean | mitochondrion | 16.0 | 40.0 |
| TraesCS4A01G227100.1 | Wheat | mitochondrion | 46.91 | 39.81 |
| TraesCS4B01G089200.1 | Wheat | mitochondrion | 46.18 | 39.32 |
| TraesCS4D01G086700.1 | Wheat | mitochondrion | 46.55 | 39.26 |
| HORVU7Hr1G120340.1 | Barley | plastid | 50.91 | 39.22 |
| Solyc07g015920.1.1 | Tomato | extracellular | 38.18 | 38.18 |
| HORVU4Hr1G015310.3 | Barley | endoplasmic reticulum, plastid | 46.18 | 35.88 |
| Os11t0242600-00 | Rice | mitochondrion | 40.36 | 35.13 |
| EES08266 | Sorghum | mitochondrion | 40.36 | 33.84 |
| Zm00001d003239_P001 | Maize | cytosol | 18.91 | 31.14 |
| Solyc02g093090.1.1 | Tomato | extracellular, nucleus | 34.18 | 30.52 |
| Solyc11g020470.1.1 | Tomato | cytosol | 16.73 | 30.46 |
| Solyc01g107800.2.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion, plastid | 33.82 | 29.62 |
| Solyc03g110890.1.1 | Tomato | plasma membrane, vacuole | 29.09 | 26.58 |
Protein Annotations
| EnsemblPlants:Solyc01g103360.2.1 | EnsemblPlantsGene:Solyc01g103360.2 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF4 |
| PFAM:PF04669 | SEG:seg | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI000276822E | UniProt:K4B1R2 |
| MapMan:21.2.2.2.3 | : | : | : | : | : |
Description
Glucuronoxylan 4-O-methyltransferase 1 [Source:Projected from Arabidopsis thaliana (AT1G09610) UniProtKB/Swiss-Prot;Acc:Q6NMK1]
Coordinates
chr1:+:91986388..91987420
Molecular Weight (calculated)
31032.6 Da
IEP (calculated)
8.642
GRAVY (calculated)
-0.185
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPKTHGSVS LKLLLICVFI AFLLLFVLRS TLTLSSVSTS SSKSTCSSPK CNKIPSSVAK SLIHYATSAI TPQQTQKEIL VTSKILDKKS PSNFLVFGLG
101: HDSLMWHTLN YGGRTIFLEE DEAWIQQIKK RFPMLESYHV TYDSKVNQAN VLIEAGKGTE CTTIADPRYS MCQLALKGLP SEIYDIKWDL IMVDAPTGYY
201: EDAPGRMTAI YTAGMMARNR EDGETHVFVH DVNRDVEDKF SREFLCEGYM KKQVGRLRHF TIPSHKSNLN MPFCP
101: HDSLMWHTLN YGGRTIFLEE DEAWIQQIKK RFPMLESYHV TYDSKVNQAN VLIEAGKGTE CTTIADPRYS MCQLALKGLP SEIYDIKWDL IMVDAPTGYY
201: EDAPGRMTAI YTAGMMARNR EDGETHVFVH DVNRDVEDKF SREFLCEGYM KKQVGRLRHF TIPSHKSNLN MPFCP
001: MRPKANQNHK LKVLLVFLLA TLILIFIVRS TLTSSQEHQT PQETRSTRCS GACNKLPRSL AQALIHYSTS VITPQQTLKE IAVSSRVLGK KSPCNFLVFG
101: LGHDSLMWSS LNYGGRTVFL EEDEAWIKQI KRRFPMLESY HVTYDSKVNQ ADNLIEVGKG PECTAIGDPR YSMCQLALKG LPAEIYETGW DLIMVDAPTG
201: YYDEAPGRMT AIYTAGMMAR NRKQGGETDV FVHDVNREIE DKFSKAFLCE GYMKKQEGRL RHFIIPSYRD GSESESNRPF CP
101: LGHDSLMWSS LNYGGRTVFL EEDEAWIKQI KRRFPMLESY HVTYDSKVNQ ADNLIEVGKG PECTAIGDPR YSMCQLALKG LPAEIYETGW DLIMVDAPTG
201: YYDEAPGRMT AIYTAGMMAR NRKQGGETDV FVHDVNREIE DKFSKAFLCE GYMKKQEGRL RHFIIPSYRD GSESESNRPF CP
Arabidopsis Description
GXM1GXM3 [Source:UniProtKB/TrEMBL;Acc:A0A178W7U8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.