Factsheet for Zm00001d025663_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003334_P001
Zm00001d005997_P002
Zm00001d020879_P001
Zm00001d025667_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G57280.1	Zm00001d003334_P001	AT4G26455.1	21798944
AT3G57280.1	Zm00001d005997_P002	AT4G26455.1	21798944
AT3G57280.1	Zm00001d020879_P001	AT4G26455.1	21798944
AT3G57280.1	Zm00001d025667_P001	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12340	Sorghum	plastid	94.52	93.24
TraesCS2D01G331600.1	Wheat	mitochondrion, plastid	73.97	73.3
TraesCS2A01G331300.1	Wheat	plastid	74.43	69.96
Os04t0470300-01	Rice	plastid	71.23	69.96
TraesCS2B01G350900.1	Wheat	plastid	73.06	68.67
Zm00001d037138_P001	Maize	extracellular	23.29	62.96
Zm00001d035128_P001	Maize	extracellular	36.07	61.24
HORVU2Hr1G081780.5	Barley	plastid	68.49	60.48
Zm00001d036684_P001	Maize	plastid	24.66	55.67
Zm00001d031990_P001	Maize	extracellular	36.07	55.63
CDX88938	Canola	extracellular	25.57	45.53
Solyc04g016440.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane, plastid	28.77	43.75
Zm00001d021040_P001	Maize	golgi, peroxisome, plasma membrane	33.33	42.69
CDY30992	Canola	plastid	33.79	42.29
PGSC0003DMT400021095	Potato	cytosol, nucleus, plasma membrane	34.7	39.58
Zm00001d007235_P001	Maize	plasma membrane	38.36	37.0
Bra007316.1-P	Field mustard	plastid	36.07	36.41
Bra014634.1-P	Field mustard	extracellular	26.03	35.62
CDX72054	Canola	plastid	36.07	35.59
GSMUA_Achr9P12790_001	Banana	plastid	40.18	35.48
CDY06118	Canola	plastid	35.16	35.32
GSMUA_Achr3P04170_001	Banana	plastid	39.73	35.22
Solyc10g079260.1.1	Tomato	plastid	36.53	34.78
Zm00001d049001_P001	Maize	mitochondrion	31.51	34.67
Zm00001d018927_P001	Maize	mitochondrion	41.55	34.34
AT3G57280.1	Thale cress	plastid	35.16	34.07
CDY33831	Canola	plastid	35.16	33.77
CDX67684	Canola	plastid	34.7	33.63
PGSC0003DMT400033126	Potato	plastid	33.33	32.02
VIT_00s0252g00030.t01	Wine grape	plastid	33.33	31.88
KRH66851	Soybean	plastid	33.33	31.74
Zm00001d013817_P001	Maize	endoplasmic reticulum, extracellular, vacuole	17.35	31.67
KRG95172	Soybean	mitochondrion	32.88	31.3
GSMUA_Achr4P01650_001	Banana	mitochondrion	27.85	30.05
Zm00001d033054_P001	Maize	mitochondrion	19.63	22.16
Zm00001d045615_P001	Maize	cytosol, endoplasmic reticulum, plastid	34.7	17.31

Protein Annotations

Gene3D:1.20.58.1140	EntrezGene:100192926	MapMan:5.8.3	ProteinID:AQK44202.1	ProteinID:AQK44203.1	ProteinID:AQK44204.1
UniProt:B4FD53	EMBL:BT035041	ncoils:Coil	EMBL:EU966827	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PFAM:PF03647	PANTHER:PTHR12668	PANTHER:PTHR12668:SF16	InterPro:TMEM14	TMHMM:TMhelix
UniParc:UPI00017B663C	EnsemblPlantsGene:Zm00001d025663	EnsemblPlants:Zm00001d025663_P003	EnsemblPlants:Zm00001d025663_T003	SEG:seg	:

Description

Protein FATTY ACID EXPORT 1 chloroplastic

Coordinates

chr10:-:125363945..125369623

Molecular Weight (calculated)

23574.8 Da

IEP (calculated)

10.243

GRAVY (calculated)

0.259

Length

219 amino acids

Sequence
(BLAST)

001: MAAAAQLHGS AAATVAYRGT RAYSVPSSCR WPQSGSPKLS ISTSGVSMKP FGFAAKLSTK CANENARVEE LDLRSDQMKE LQVEEQVIPQ KRSAKIHDFC
101: LGIPFGGLLF SMGLLGYIFS RSTISLVLGI APGLATLLLG TLSLKFWRSG RSSFLLILAQ AAISAFLAWK YSHAYFLTNR LLPWGFYASL STAMGCFYAY
201: VLLAGGNPPP KKLAAIPPQ

Best Arabidopsis Sequence Match ( AT3G57280.1 )
(BLAST)

001: MASQISQLAC FSSTNRQFHF QSRSFPCPMI RPQSFVVKSV DGNSSETPAS LSYTAEVSKP VVEKTSKPYS TVDETATNKE SITEPVEEDV ATQPIRAAKI
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY

Arabidopsis Description

FAX1Protein FATTY ACID EXPORT 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.