Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G081800.3 | |
| HORVU5Hr1G071910.1 | |
| HORVU7Hr1G048940.3 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G57280.1 | HORVU2Hr1G081800.3 | AT4G26455.1 | 21798944 |
| AT3G57280.1 | HORVU5Hr1G071910.1 | AT4G26455.1 | 21798944 |
| AT3G57280.1 | HORVU7Hr1G048940.3 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G331300.1 | Wheat | plastid | 83.06 | 88.41 |
| TraesCS2D01G331600.1 | Wheat | mitochondrion, plastid | 77.82 | 87.33 |
| TraesCS2B01G350900.1 | Wheat | plastid | 81.05 | 86.27 |
| Zm00001d025663_P003 | Maize | plastid | 60.48 | 68.49 |
| EES12340 | Sorghum | plastid | 60.08 | 67.12 |
| Os04t0470300-01 | Rice | plastid | 60.08 | 66.82 |
| Zm00001d037138_P001 | Maize | extracellular | 19.35 | 59.26 |
| Zm00001d035128_P001 | Maize | extracellular | 27.02 | 51.94 |
| Zm00001d036684_P001 | Maize | plastid | 19.35 | 49.48 |
| Zm00001d031990_P001 | Maize | extracellular | 26.61 | 46.48 |
| Solyc04g016440.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 26.21 | 45.14 |
| CDX88938 | Canola | extracellular | 21.37 | 43.09 |
| CDY30992 | Canola | plastid | 28.63 | 40.57 |
| PGSC0003DMT400021095 | Potato | cytosol, nucleus, plasma membrane | 28.23 | 36.46 |
| Bra014634.1-P | Field mustard | extracellular | 23.39 | 36.25 |
| CDX72054 | Canola | plastid | 31.85 | 35.59 |
| Bra007316.1-P | Field mustard | plastid | 31.05 | 35.48 |
| AT3G57280.1 | Thale cress | plastid | 31.85 | 34.96 |
| CDY33831 | Canola | plastid | 31.85 | 34.65 |
| CDY06118 | Canola | plastid | 30.24 | 34.4 |
| CDX67684 | Canola | plastid | 31.05 | 34.07 |
| HORVU7Hr1G045420.1 | Barley | cytosol, peroxisome | 40.32 | 32.89 |
| GSMUA_Achr9P12790_001 | Banana | plastid | 32.66 | 32.66 |
| GSMUA_Achr3P04170_001 | Banana | plastid | 32.26 | 32.39 |
| KRH66851 | Soybean | plastid | 29.84 | 32.17 |
| Solyc10g079260.1.1 | Tomato | plastid | 29.44 | 31.74 |
| KRG95172 | Soybean | mitochondrion | 29.44 | 31.74 |
| Zm00001d049001_P001 | Maize | mitochondrion | 25.4 | 31.66 |
| PGSC0003DMT400033126 | Potato | plastid | 29.03 | 31.58 |
| Zm00001d007235_P001 | Maize | plasma membrane | 28.23 | 30.84 |
| VIT_00s0252g00030.t01 | Wine grape | plastid | 27.82 | 30.13 |
| GSMUA_Achr4P01650_001 | Banana | mitochondrion | 22.58 | 27.59 |
| HORVU2Hr1G046220.7 | Barley | extracellular, golgi | 12.5 | 21.83 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G081780.5 | EnsemblPlantsGene:HORVU2Hr1G081780 | Gene3D:1.20.58.1140 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:TMEM14 | PANTHER:PTHR12668 | PANTHER:PTHR12668:SF16 | PFAM:PF03647 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000B4611A5 | UniProt:A0A287IMQ7 | MapMan:5.8.3 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:593165708..593169041
Molecular Weight (calculated)
26852.8 Da
IEP (calculated)
10.323
GRAVY (calculated)
0.378
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKSPVSPSQ SHMAVAAAQL RGSAMVARRH GAFRGGSCRW PRHPLAGSLK FSVSTSGVSG KLFGFGAKIA KKCVNENTRA EELNSRSDQA GELVAPVEDV
101: TPQKRSSKIH DFCFGIPFGG LLFCMGLLGY FFSRSTVSLV LGVAPGLATL FLSTLSLNFW RSGRSSFLFI LGQAAISAVL AWKYSHAYLL VSTVDVPFLW
201: IISFRDTELI IISVLQTNRI LPWGFYASLS TAMACFYVYV LLAGGNPP
101: TPQKRSSKIH DFCFGIPFGG LLFCMGLLGY FFSRSTVSLV LGVAPGLATL FLSTLSLNFW RSGRSSFLFI LGQAAISAVL AWKYSHAYLL VSTVDVPFLW
201: IISFRDTELI IISVLQTNRI LPWGFYASLS TAMACFYVYV LLAGGNPP
001: MASQISQLAC FSSTNRQFHF QSRSFPCPMI RPQSFVVKSV DGNSSETPAS LSYTAEVSKP VVEKTSKPYS TVDETATNKE SITEPVEEDV ATQPIRAAKI
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY
Arabidopsis Description
FAX1Protein FATTY ACID EXPORT 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V66]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.