Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 5
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G331000.1
TraesCS2B01G351300.1
TraesCS2D01G332000.1
TraesCS5A01G257000.1
TraesCS5B01G256500.1
TraesCS5D01G265600.1
TraesCS7A01G240200.1
TraesCS7B01G135800.1
TraesCS7D01G238200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G57280.1 TraesCS2A01G331000.1 AT4G26455.1 21798944
AT3G57280.1 TraesCS2B01G351300.1 AT4G26455.1 21798944
AT3G57280.1 TraesCS2D01G332000.1 AT4G26455.1 21798944
AT3G57280.1 TraesCS5A01G257000.1 AT4G26455.1 21798944
AT3G57280.1 TraesCS5B01G256500.1 AT4G26455.1 21798944
AT3G57280.1 TraesCS5D01G265600.1 AT4G26455.1 21798944
AT3G57280.1 TraesCS7A01G240200.1 AT4G26455.1 21798944
AT3G57280.1 TraesCS7B01G135800.1 AT4G26455.1 21798944
AT3G57280.1 TraesCS7D01G238200.1 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G331300.1 Wheat plastid 97.29 92.27
TraesCS2B01G350900.1 Wheat plastid 95.02 90.13
HORVU2Hr1G081780.5 Barley plastid 87.33 77.82
Zm00001d025663_P003 Maize plastid 73.3 73.97
Os04t0470300-01 Rice plastid 73.3 72.65
EES12340 Sorghum plastid 72.85 72.52
Zm00001d037138_P001 Maize extracellular 22.62 61.73
Zm00001d035128_P001 Maize extracellular 31.22 53.49
Zm00001d036684_P001 Maize plastid 22.62 51.55
Zm00001d031990_P001 Maize extracellular 31.22 48.59
Solyc04g016440.2.1 Tomato endoplasmic reticulum, peroxisome, plasma membrane, plastid 30.77 47.22
CDX88938 Canola extracellular 25.79 46.34
CDY30992 Canola plastid 34.84 44.0
TraesCS7D01G222200.2 Wheat plastid 46.61 42.74
PGSC0003DMT400021095 Potato cytosol, nucleus, plasma membrane 33.94 39.06
AT3G57280.1 Thale cress plastid 38.91 38.05
Bra007316.1-P Field mustard plastid 37.1 37.79
CDY33831 Canola plastid 38.46 37.28
CDX67684 Canola plastid 38.01 37.17
CDY06118 Canola plastid 36.65 37.16
CDX72054 Canola plastid 37.1 36.94
Bra014634.1-P Field mustard extracellular 26.7 36.88
GSMUA_Achr3P04170_001 Banana plastid 40.27 36.03
GSMUA_Achr9P12790_001 Banana plastid 39.82 35.48
TraesCS7D01G191200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 19.0 35.29
Solyc10g079260.1.1 Tomato plastid 36.2 34.78
KRH66851 Soybean plastid 35.29 33.91
KRG95172 Soybean mitochondrion 35.29 33.91
PGSC0003DMT400033126 Potato plastid 34.39 33.33
Zm00001d049001_P001 Maize mitochondrion 28.96 32.16
Zm00001d007235_P001 Maize plasma membrane 33.03 32.16
VIT_00s0252g00030.t01 Wine grape plastid 33.03 31.88
GSMUA_Achr4P01650_001 Banana mitochondrion 25.79 28.08
Protein Annotations
EnsemblPlants:TraesCS2D01G331600.1EnsemblPlantsGene:TraesCS2D01G331600Gene3D:1.20.58.1140GO:GO:0005575GO:GO:0016020InterPro:TMEM14
PANTHER:PTHR12668PANTHER:PTHR12668:SF16PFAM:PF03647SEG:segTMHMM:TMhelixMapMan:5.8.3
Description
No Description!
Coordinates
chr2D:-:423999069..424006875
Molecular Weight (calculated)
23569.6 Da
IEP (calculated)
10.454
GRAVY (calculated)
0.258
Length
221 amino acids
Sequence
(BLAST)
001: MAVAAAQLRG SSTVARRHGV FRVPSSCRWP RHPFAGSLKL SVSTSGVGGK PFGFGAKIAT KCANENTRAE ELNSRSDQAG ELVEAVEDVT PQKRSAKIHD
101: FCFGIPFGGL LFCMGLLGYF FSRSTVSLVL GVAPGLATLL LGTLSLNFWR SGRSSFLFIL GQAAISAVLA WKYSHAYLLT NRILPWGFYA SLSTAMACFY
201: AYVLLAGGNP PPKKLAPAPS S
Best Arabidopsis Sequence Match ( AT3G20510.1 )
(BLAST)
001: MHDFCFTIPY GMLLIGGGFI GYMKKGSITS FAGGAGTGLL LILAGYISLK AFEKKKNSTI AMVLQTVIAA ALTLVMGQRY LLTGKIMPAG LVAGISALMT
101: CFYVYKIATG GNKFPAKAE
Arabidopsis Description
FAX6Protein FATTY ACID EXPORT 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU6]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.