Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- plastid 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc07g066170.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G57280.1 | Solyc07g066170.2.1 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88938 | Canola | extracellular | 50.69 | 59.35 |
| PGSC0003DMT400033126 | Potato | plastid | 88.19 | 55.7 |
| CDY30992 | Canola | plastid | 59.03 | 48.57 |
| Bra014634.1-P | Field mustard | extracellular | 53.47 | 48.12 |
| Solyc10g079260.1.1 | Tomato | plastid | 73.61 | 46.09 |
| KRG95172 | Soybean | mitochondrion | 66.67 | 41.74 |
| VIT_00s0252g00030.t01 | Wine grape | plastid | 65.97 | 41.48 |
| Bra007316.1-P | Field mustard | plastid | 62.5 | 41.47 |
| KRH66851 | Soybean | plastid | 65.97 | 41.3 |
| CDY06118 | Canola | plastid | 62.5 | 41.28 |
| CDY33831 | Canola | plastid | 63.19 | 39.91 |
| AT3G57280.1 | Thale cress | plastid | 61.81 | 39.38 |
| CDX72054 | Canola | plastid | 60.42 | 39.19 |
| CDX67684 | Canola | plastid | 61.11 | 38.94 |
| Solyc07g064470.2.1 | Tomato | endoplasmic reticulum, extracellular | 29.17 | 35.29 |
| Zm00001d037138_P001 | Maize | extracellular | 19.44 | 34.57 |
| Solyc10g006310.2.1 | Tomato | endoplasmic reticulum, extracellular | 27.78 | 33.61 |
| GSMUA_Achr3P04170_001 | Banana | plastid | 56.94 | 33.2 |
| Zm00001d021040_P001 | Maize | golgi, peroxisome, plasma membrane | 38.89 | 32.75 |
| Zm00001d036684_P001 | Maize | plastid | 21.53 | 31.96 |
| GSMUA_Achr9P12790_001 | Banana | plastid | 54.17 | 31.45 |
| TraesCS2D01G331600.1 | Wheat | mitochondrion, plastid | 47.22 | 30.77 |
| Os04t0470300-01 | Rice | plastid | 46.53 | 30.04 |
| Os06t0301100-01 | Rice | plastid | 49.31 | 29.96 |
| TraesCS7B01G127500.2 | Wheat | plastid | 49.31 | 29.58 |
| TraesCS7D01G222200.2 | Wheat | plastid | 49.31 | 29.46 |
| EER98049 | Sorghum | plastid | 51.39 | 29.37 |
| TraesCS2A01G331300.1 | Wheat | plastid | 47.22 | 29.18 |
| TraesCS2B01G350900.1 | Wheat | plastid | 47.22 | 29.18 |
| TraesCS7A01G219900.2 | Wheat | plastid | 48.61 | 29.05 |
| Zm00001d025663_P003 | Maize | plastid | 43.75 | 28.77 |
| EES12340 | Sorghum | plastid | 43.06 | 27.93 |
| Zm00001d018927_P001 | Maize | mitochondrion | 50.69 | 27.55 |
| Zm00001d035128_P001 | Maize | extracellular | 24.31 | 27.13 |
| HORVU2Hr1G081780.5 | Barley | plastid | 45.14 | 26.21 |
| Zm00001d031990_P001 | Maize | extracellular | 25.0 | 25.35 |
| HORVU7Hr1G045420.1 | Barley | cytosol, peroxisome | 49.31 | 23.36 |
| GSMUA_Achr4P01650_001 | Banana | mitochondrion | 31.94 | 22.66 |
| Zm00001d049001_P001 | Maize | mitochondrion | 23.61 | 17.09 |
| Zm00001d007235_P001 | Maize | plasma membrane | 25.69 | 16.3 |
| Zm00001d045615_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 38.89 | 12.76 |
Protein Annotations
| EnsemblPlants:Solyc04g016440.2.1 | EnsemblPlantsGene:Solyc04g016440.2 | Gene3D:1.20.58.1140 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:TMEM14 | PANTHER:PTHR12668 | PANTHER:PTHR12668:SF18 | PFAM:PF03647 | TMHMM:TMhelix | UniParc:UPI000276716B |
| UniProt:K4BQE4 | MapMan:5.8.3 | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:7257601..7260651
Molecular Weight (calculated)
15400.0 Da
IEP (calculated)
11.117
GRAVY (calculated)
0.476
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGSVQENSI SPSKRTAKIH DFCFGIPFGS LVFTGGIVGF IFSRNPATLS NGVLFGGALL AFSTISLRVW RQGKSSLPFI LGQAVLAAVL LWKNMQTFSL
101: TRKVFPTGFY AAMSAAMFCF YSYVVLSGGN PLPKKLKVSA AGTS
101: TRKVFPTGFY AAMSAAMFCF YSYVVLSGGN PLPKKLKVSA AGTS
001: MASQISQLAC FSSTNRQFHF QSRSFPCPMI RPQSFVVKSV DGNSSETPAS LSYTAEVSKP VVEKTSKPYS TVDETATNKE SITEPVEEDV ATQPIRAAKI
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY
Arabidopsis Description
FAX1Protein FATTY ACID EXPORT 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V66]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.