Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G081800.3 | |
| HORVU5Hr1G071910.1 | |
| HORVU7Hr1G048940.3 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G57280.1 | HORVU2Hr1G081800.3 | AT4G26455.1 | 21798944 |
| AT3G57280.1 | HORVU5Hr1G071910.1 | AT4G26455.1 | 21798944 |
| AT3G57280.1 | HORVU7Hr1G048940.3 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G219900.2 | Wheat | plastid | 73.68 | 92.95 |
| TraesCS7D01G222200.2 | Wheat | plastid | 73.36 | 92.53 |
| TraesCS7B01G127500.2 | Wheat | plastid | 72.7 | 92.08 |
| Os06t0301100-01 | Rice | plastid | 55.26 | 70.89 |
| Zm00001d021040_P001 | Maize | golgi, peroxisome, plasma membrane | 32.57 | 57.89 |
| EER98049 | Sorghum | plastid | 47.37 | 57.14 |
| Solyc04g016440.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 23.36 | 49.31 |
| Zm00001d018927_P001 | Maize | mitochondrion | 42.43 | 48.68 |
| CDX88938 | Canola | extracellular | 18.42 | 45.53 |
| CDY30992 | Canola | plastid | 23.68 | 41.14 |
| HORVU2Hr1G081780.5 | Barley | plastid | 32.89 | 40.32 |
| PGSC0003DMT400021095 | Potato | cytosol, nucleus, plasma membrane | 25.33 | 40.1 |
| GSMUA_Achr9P12790_001 | Banana | plastid | 31.25 | 38.31 |
| Bra007316.1-P | Field mustard | plastid | 26.64 | 37.33 |
| GSMUA_Achr3P04170_001 | Banana | plastid | 30.26 | 37.25 |
| PGSC0003DMT400033126 | Potato | plastid | 27.63 | 36.84 |
| Bra014634.1-P | Field mustard | extracellular | 19.08 | 36.25 |
| CDY06118 | Canola | plastid | 25.99 | 36.24 |
| CDX67684 | Canola | plastid | 26.64 | 35.84 |
| CDY33831 | Canola | plastid | 26.64 | 35.53 |
| Solyc10g079260.1.1 | Tomato | plastid | 26.64 | 35.22 |
| CDX72054 | Canola | plastid | 25.66 | 35.14 |
| KRG95172 | Soybean | mitochondrion | 26.32 | 34.78 |
| KRH66851 | Soybean | plastid | 26.32 | 34.78 |
| AT3G57280.1 | Thale cress | plastid | 25.33 | 34.07 |
| VIT_00s0252g00030.t01 | Wine grape | plastid | 25.33 | 33.62 |
| GSMUA_Achr4P01650_001 | Banana | mitochondrion | 19.74 | 29.56 |
| Zm00001d045615_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 40.13 | 27.79 |
| HORVU2Hr1G046220.7 | Barley | extracellular, golgi | 10.53 | 22.54 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G045420.1 | EnsemblPlantsGene:HORVU7Hr1G045420 | Gene3D:1.20.58.1140 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:TMEM14 | PANTHER:PTHR12668 | PANTHER:PTHR12668:SF18 | PFAM:PF03647 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000B48569B | UniProt:A0A287WB85 | MapMan:5.8.3 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:143933982..143938075
Molecular Weight (calculated)
32420.4 Da
IEP (calculated)
10.902
GRAVY (calculated)
-0.023
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: DLLATCPVES RRREEQAGTR SSRVANDSLL LLHLPPSHHR PPPRPGTRHS PPLPRAPRGN PRPYARAPMA ASQLRGSAAP GTARRWPAPS GAILRFAPLA
101: TSRLPAASLR RRGAFSGLSS SVARESLTTM CMKSKCTSTP IDQATAPEHT EDEVPEQAAV VTASEEINIH QEVAPPQKSA IIHDFCLGIP FGGLLFSMGL
201: VGFLFWRSPV SLTFGVAPGL AILGLAVLSL KGWRSGKSSL PFILAQAAVA AAVAWKHCQA YTTTKKLLPW GFYTALSALM ICFYSYVLLA GGNPPPKKKP
301: AAAI
101: TSRLPAASLR RRGAFSGLSS SVARESLTTM CMKSKCTSTP IDQATAPEHT EDEVPEQAAV VTASEEINIH QEVAPPQKSA IIHDFCLGIP FGGLLFSMGL
201: VGFLFWRSPV SLTFGVAPGL AILGLAVLSL KGWRSGKSSL PFILAQAAVA AAVAWKHCQA YTTTKKLLPW GFYTALSALM ICFYSYVLLA GGNPPPKKKP
301: AAAI
001: MASQISQLAC FSSTNRQFHF QSRSFPCPMI RPQSFVVKSV DGNSSETPAS LSYTAEVSKP VVEKTSKPYS TVDETATNKE SITEPVEEDV ATQPIRAAKI
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY
Arabidopsis Description
FAX1Protein FATTY ACID EXPORT 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V66]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.