Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400022426 | |
| PGSC0003DMT400056956 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G57280.1 | PGSC0003DMT400022426 | AT4G26455.1 | 21798944 |
| AT3G57280.1 | PGSC0003DMT400056956 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g016440.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 55.7 | 88.19 |
| CDX88938 | Canola | extracellular | 32.02 | 59.35 |
| CDY30992 | Canola | plastid | 42.54 | 55.43 |
| PGSC0003DMT400021095 | Potato | cytosol, nucleus, plasma membrane | 46.05 | 54.69 |
| VIT_00s0252g00030.t01 | Wine grape | plastid | 52.19 | 51.97 |
| Bra007316.1-P | Field mustard | plastid | 48.68 | 51.15 |
| CDY06118 | Canola | plastid | 47.81 | 50.0 |
| CDX72054 | Canola | plastid | 46.93 | 48.2 |
| Bra014634.1-P | Field mustard | extracellular | 33.77 | 48.12 |
| KRG95172 | Soybean | mitochondrion | 47.81 | 47.39 |
| KRH66851 | Soybean | plastid | 47.37 | 46.96 |
| CDX67684 | Canola | plastid | 44.74 | 45.13 |
| CDY33831 | Canola | plastid | 44.74 | 44.74 |
| AT3G57280.1 | Thale cress | plastid | 43.86 | 44.25 |
| Zm00001d037138_P001 | Maize | extracellular | 13.16 | 37.04 |
| GSMUA_Achr3P04170_001 | Banana | plastid | 38.6 | 35.63 |
| GSMUA_Achr9P12790_001 | Banana | plastid | 38.6 | 35.48 |
| Zm00001d021040_P001 | Maize | golgi, peroxisome, plasma membrane | 26.32 | 35.09 |
| TraesCS7B01G127500.2 | Wheat | plastid | 36.4 | 34.58 |
| TraesCS2D01G331600.1 | Wheat | mitochondrion, plastid | 33.33 | 34.39 |
| Os06t0301100-01 | Rice | plastid | 35.53 | 34.18 |
| TraesCS7D01G222200.2 | Wheat | plastid | 35.96 | 34.02 |
| TraesCS7A01G219900.2 | Wheat | plastid | 35.96 | 34.02 |
| Zm00001d036684_P001 | Maize | plastid | 14.47 | 34.02 |
| PGSC0003DMT400037293 | Potato | endoplasmic reticulum, extracellular | 17.54 | 33.61 |
| Zm00001d025663_P003 | Maize | plastid | 32.02 | 33.33 |
| EER98049 | Sorghum | plastid | 36.4 | 32.94 |
| Os04t0470300-01 | Rice | plastid | 32.02 | 32.74 |
| TraesCS2B01G350900.1 | Wheat | plastid | 32.89 | 32.19 |
| TraesCS2A01G331300.1 | Wheat | plastid | 32.89 | 32.19 |
| EES12340 | Sorghum | plastid | 31.14 | 31.98 |
| Zm00001d018927_P001 | Maize | mitochondrion | 36.84 | 31.7 |
| PGSC0003DMT400057207 | Potato | endoplasmic reticulum, extracellular | 12.72 | 31.18 |
| HORVU2Hr1G081780.5 | Barley | plastid | 31.58 | 29.03 |
| GSMUA_Achr4P01650_001 | Banana | mitochondrion | 25.0 | 28.08 |
| HORVU7Hr1G045420.1 | Barley | cytosol, peroxisome | 36.84 | 27.63 |
| Zm00001d035128_P001 | Maize | extracellular | 15.35 | 27.13 |
| Zm00001d031990_P001 | Maize | extracellular | 15.79 | 25.35 |
| Zm00001d049001_P001 | Maize | mitochondrion | 16.23 | 18.59 |
| Zm00001d007235_P001 | Maize | plasma membrane | 16.23 | 16.3 |
| Zm00001d045615_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 28.07 | 14.58 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400033126 | EnsemblPlantsGene:PGSC0003DMG400012719 | EntrezGene:102605454 | Gene3D:1.20.58.1140 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:TMEM14 | PANTHER:PTHR12668 | PANTHER:PTHR12668:SF18 | PFAM:PF03647 | PGSC:PGSC0003DMG400012719 |
| RefSeq:XP_015169220.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000295B2EC | UniProt:M1AYN0 | MapMan:5.8.3 |
Description
Transmembrane protein 14 [Source:PGSC_GENE;Acc:PGSC0003DMG400012719]
Coordinates
chr4:-:11141445..11146637
Molecular Weight (calculated)
24665.8 Da
IEP (calculated)
10.599
GRAVY (calculated)
0.046
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTISQLSC FSSINRRFLF HTHLHPCSTL PRKVVVVRND AHGTDLSNLE NRNTLGCTRD ESQSHNGSSS NSNLKSDELV PGKEMKGSVQ ENSISPSKRT
101: AKIHDFCFGI PFGGLVFSGG IVGFIFSRNP ATLSNGVLFG GALLAFSTIS LRVWRQGKSS LPFILGQAVV AAILLWKNMQ TFSLTRKVFP TGFYAAMSAA
201: MFCFYSYVVL SGGNPLPKKL KVSATGTS
101: AKIHDFCFGI PFGGLVFSGG IVGFIFSRNP ATLSNGVLFG GALLAFSTIS LRVWRQGKSS LPFILGQAVV AAILLWKNMQ TFSLTRKVFP TGFYAAMSAA
201: MFCFYSYVVL SGGNPLPKKL KVSATGTS
001: MASQISQLAC FSSTNRQFHF QSRSFPCPMI RPQSFVVKSV DGNSSETPAS LSYTAEVSKP VVEKTSKPYS TVDETATNKE SITEPVEEDV ATQPIRAAKI
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY
Arabidopsis Description
FAX1Protein FATTY ACID EXPORT 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V66]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.