CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14983	Soybean	mitochondrion	91.35	91.35
KRH59918	Soybean	peroxisome	86.85	87.46
KRH41192	Soybean	endoplasmic reticulum	86.85	86.85
KRH27918	Soybean	plasma membrane	84.78	85.66
KRH77555	Soybean	plasma membrane	84.08	84.97
KRH66037	Soybean	golgi, peroxisome, plasma membrane	83.39	84.86
KRH73156	Soybean	golgi, peroxisome, plasma membrane	91.0	82.45
KRH00178	Soybean	golgi, peroxisome, plasma membrane	81.66	82.23
KRG97766	Soybean	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	37.37	80.6
KRG95980	Soybean	plasma membrane	67.13	68.07
KRH60692	Soybean	mitochondrion	64.71	68.0
KRG91899	Soybean	plasma membrane	66.09	67.25
KRH67688	Soybean	plasma membrane	66.44	67.13
KRH29919	Soybean	mitochondrion	65.74	66.43
KRH51390	Soybean	plasma membrane	63.67	66.19
KRH25011	Soybean	mitochondrion	65.4	66.08
KRH08522	Soybean	plasma membrane	65.05	65.96
KRH70183	Soybean	mitochondrion	65.05	65.96
KRH08523	Soybean	plasma membrane	65.05	65.96
KRH26410	Soybean	golgi, peroxisome, plasma membrane	65.05	65.51
KRH22889	Soybean	golgi, peroxisome, plasma membrane	64.71	65.16
KRH70184	Soybean	plasma membrane	64.01	64.91
KRH34875	Soybean	plasma membrane	66.44	64.86
KRH75838	Soybean	golgi, peroxisome, plasma membrane	80.62	64.19
KRH16406	Soybean	extracellular	33.56	63.4
KRG93712	Soybean	plasma membrane, vacuole	30.1	36.71
KRH09912	Soybean	endoplasmic reticulum, plasma membrane, vacuole	30.45	35.63
KRH23420	Soybean	plasma membrane, vacuole	30.45	35.63
KRH44312	Soybean	extracellular	30.45	35.48
KRH34280	Soybean	endoplasmic reticulum	31.14	35.43
KRH47241	Soybean	mitochondrion	30.1	35.08
KRG92517	Soybean	cytosol	30.45	34.65
KRH38823	Soybean	nucleus	30.45	34.51
KRH09321	Soybean	cytosol, mitochondrion, plasma membrane	30.45	34.51
KRH70511	Soybean	cytosol	29.76	34.13
KRH28112	Soybean	mitochondrion	29.07	33.73
KRH77347	Soybean	mitochondrion	29.07	33.73
KRH23017	Soybean	cytosol, plasma membrane, vacuole	29.07	33.33
KRH01591	Soybean	cytosol	29.07	33.33
KRH10300	Soybean	endoplasmic reticulum, extracellular	18.34	33.12
KRH29856	Soybean	cytosol, plasma membrane, vacuole	28.37	32.54
KRH24847	Soybean	endoplasmic reticulum, plasma membrane, vacuole	27.34	32.24
KRH52727	Soybean	cytosol	27.34	32.11
KRH67767	Soybean	mitochondrion	27.68	32.0
KRH62059	Soybean	cytosol, plasma membrane, vacuole	26.99	31.71
KRG96046	Soybean	nucleus	26.99	31.2
KRH36204	Soybean	cytosol, extracellular, mitochondrion, plasma membrane	26.99	30.95
KRH19959	Soybean	mitochondrion	26.3	30.4
KRG90553	Soybean	extracellular	24.91	29.63
KRH23943	Soybean	plasma membrane	17.65	27.87
KRH39857	Soybean	plastid	23.53	26.98

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100791447	MapMan:24.3.1.2	EMBL:ACUP02007123	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EMBL:BT096175	UniProt:C6TEZ8	EnsemblPlantsGene:GLYMA_11G228000	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150
GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
InterPro:IPR023271	EnsemblPlants:KRH31119	ProteinID:KRH31119	ProteinID:KRH31119.1	InterPro:MIP	InterPro:MIP_CS
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF259	SUPFAM:SSF81338
TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00019D342E	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:32310610..32312178

Molecular Weight (calculated)

30781.3 Da

IEP (calculated)

7.658

GRAVY (calculated)

0.411

Length

289 amino acids

Sequence
(BLAST)

001: MEGKEEDVSL GANKFSERQP IGTAAQSQDD GKDYTEPPPA PLFEPSELTS WSFYRAGIAE FVATFLFLYI TILTVMGVNR SSSKCATVGI QGIAWAFGGM
101: IFALVYCTAG ISGGHINPAV TFGLFLARKL SLTRALFYMV MQVLGAIVGA GVVKGFEGKT FYGQHNGGAN FVAPGYTKGD GLGAEIVGTF ILVYTVFSAT
201: DAKRSARDSH VPILAPLPIG FAVFLVHLAT IPITGTGINP ARSLGAAIIF NKDLGWDDHW IFWVGPFVGA ALAALYHQVV IRAIPFKSS

Best Arabidopsis Sequence Match ( AT1G01620.1 )
(BLAST)

001: MEGKEEDVRV GANKFPERQP IGTSAQTDKD YKEPPPAPFF EPGELSSWSF YRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS

Arabidopsis Description

PIP1-3TMP-B [Source:UniProtKB/TrEMBL;Acc:A0A178WIA6]
SUBAcon: [golgi,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.