Factsheet for HORVU7Hr1G067110.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G084420.1
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G17170.1	HORVU2Hr1G084420.1	AT1G27300.1	21798944
AT5G17170.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G293100.1	Wheat	plastid	81.25	95.37
TraesCS7B01G189500.2	Wheat	plastid	80.92	94.98
TraesCS7A01G294700.1	Wheat	plastid	80.92	94.98
Os08t0162600-01	Rice	plastid	71.71	83.85
Bra008575.1-P	Field mustard	cytosol	43.42	69.47
CDX69400	Canola	cytosol	43.42	69.47
CDY16955	Canola	plastid	51.97	64.23
VIT_16s0039g02530.t01	Wine grape	cytosol, extracellular, plasma membrane	12.83	63.93
OQU79958	Sorghum	plastid	69.74	63.47
CDY02732	Canola	plastid	56.25	63.33
Bra023597.1-P	Field mustard	plastid	56.25	63.1
CDX85473	Canola	plastid	55.92	62.73
AT5G17170.1	Thale cress	plastid	55.59	62.36
PGSC0003DMT400001532	Potato	plastid	56.25	61.51
KRH77719	Soybean	nucleus, plastid	55.26	61.31
Solyc03g096850.2.1	Tomato	plastid	55.59	60.79
GSMUA_Achr3P00390_001	Banana	plastid	38.16	60.42
Zm00001d024519_P005	Maize	cytosol	69.08	58.82
VIT_16s0039g02540.t01	Wine grape	plastid	47.04	53.36
KRH27766	Soybean	nucleus	54.93	46.39
KRH58254	Soybean	plastid	27.3	45.11

Protein Annotations

Gene3D:2.20.28.10	Gene3D:2.30.42.10	MapMan:35.2	UniProt:A0A287WRM3	GO:GO:0003674	GO:GO:0005488
GO:GO:0005506	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009941
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:HORVU7Hr1G067110	EnsemblPlants:HORVU7Hr1G067110.3	InterPro:IPR001478	InterPro:IPR024934
InterPro:PDZ	InterPro:PDZ_sf	PFscan:PS50106	PFscan:PS50903	InterPro:Rubredoxin-like_dom	SUPFAM:SSF50156
SUPFAM:SSF57802	TMHMM:TMhelix	UniParc:UPI000B4661ED	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:-:348272701..348276066

Molecular Weight (calculated)

32433.4 Da

IEP (calculated)

10.096

GRAVY (calculated)

0.062

Length

304 amino acids

Sequence
(BLAST)

001: AHHLSPHHHQ PSYQRITMAA TLSSVSAFSN HCSVVRAQDS PLPSILSTSS AVGAIFSFPL DVSFILCVVL LMLLSVMVQK KTAFHGVALV DSRWLHKGGV
101: RRRLVQVNAK TAGAAKNIEV EVDKPLGLTL GQKSGGGVVI TGVESGGNAA RAGLKSGDQV LYTSSFFGDE LWPADKLGFT KTAIQAKPDS VYFVVSRGGG
201: DIDVKRLPKR PAPPRFGRKL SDSQKARATH ICLDCGYIYF LPKPFEEQPG EYGCPQCNAP KKRFARYNVE SGKPIGGALP PLTVIVSLVI GIAGIGALLV
301: YGLQ

Best Arabidopsis Sequence Match ( AT5G17170.1 )
(BLAST)

001: MATSGAISGA TVSSFFTKTT TTSNPSPKLH SSASLLSQKT VFQGVSLEDS KKSVSEIFAV SERKIGGLNG LRRFEIKARA AASKTIEVEV DKPLGLTLGQ
101: KQGGGVVITG VDGGGNAAKA GLKSGDQVVY TSSFFGDELW PADKLGFTKT AIQAKPDSVY FVVSRGAEVD VKKLNKRPAP PRFGRKLTET QKARATHICL
201: DCGFIYTLPK SFDEQPDTYV CPQCIAPKKR FAKYDVNTGK AIGGGLPPIG VIVGLLAGLG AVGALLVYGL Q

Arabidopsis Description

ENH1Rubredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFJ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.