Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH08383 | Soybean | plasma membrane | 72.62 | 77.38 |
| KRH70041 | Soybean | plasma membrane | 72.62 | 77.12 |
| KRH75962 | Soybean | endoplasmic reticulum, vacuole | 32.62 | 74.13 |
| KRG91881 | Soybean | extracellular, golgi, plasma membrane | 44.0 | 70.44 |
| VIT_13s0019g04120.t01 | Wine grape | plasma membrane, plastid | 66.46 | 69.45 |
| Solyc04g049180.2.1 | Tomato | extracellular, golgi, vacuole | 51.38 | 69.01 |
| CDY28006 | Canola | plasma membrane | 62.77 | 68.69 |
| CDY35975 | Canola | plasma membrane | 62.46 | 68.35 |
| Bra029689.1-P | Field mustard | plasma membrane | 63.08 | 67.43 |
| CDY22146 | Canola | plasma membrane | 61.54 | 67.34 |
| AT3G07950.1 | Thale cress | plasma membrane | 62.46 | 66.78 |
| Bra040042.1-P | Field mustard | plasma membrane | 62.46 | 66.56 |
| GSMUA_Achr7P01900_001 | Banana | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 59.08 | 60.38 |
| GSMUA_Achr4P20820_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 58.77 | 60.06 |
| EER99823 | Sorghum | plasma membrane | 58.15 | 60.0 |
| Os07t0655400-01 | Rice | plastid | 57.85 | 59.49 |
| TraesCS2B01G159600.1 | Wheat | plasma membrane, plastid | 56.31 | 58.28 |
| TraesCS2D01G138200.1 | Wheat | golgi | 56.0 | 57.96 |
| TraesCS2A01G135700.1 | Wheat | plasma membrane, plastid | 56.0 | 57.96 |
| EER92238 | Sorghum | plastid | 57.23 | 57.94 |
| Os03t0358200-00 | Rice | golgi | 53.85 | 55.73 |
| Zm00001d029226_P001 | Maize | plasma membrane | 55.38 | 53.41 |
| HORVU0Hr1G002680.2 | Barley | golgi | 44.92 | 52.14 |
| Zm00001d047446_P002 | Maize | plasma membrane, plastid | 55.69 | 51.86 |
| Zm00001d007067_P003 | Maize | plasma membrane | 57.54 | 49.87 |
| Os04t0103300-01 | Rice | peroxisome | 45.85 | 46.86 |
| TraesCS2D01G038700.1 | Wheat | plasma membrane | 44.62 | 45.45 |
| TraesCS2A01G040100.2 | Wheat | golgi, unclear | 44.62 | 45.45 |
| TraesCS2B01G053000.1 | Wheat | plasma membrane | 44.31 | 45.43 |
| EES11733 | Sorghum | plasma membrane | 43.69 | 44.51 |
| HORVU2Hr1G006030.4 | Barley | golgi, plasma membrane | 45.54 | 44.44 |
| Zm00001d024933_P003 | Maize | plasma membrane | 43.38 | 44.2 |
| Zm00001d004543_P001 | Maize | extracellular | 43.38 | 43.93 |
Protein Annotations
| EntrezGene:100805179 | MapMan:19.4.2.6 | EMBL:ACUP02006641 | InterPro:DUF1751_Mem_euk | EnsemblPlantsGene:GLYMA_10G212100 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006890 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | UniProt:I1LD21 | EnsemblPlants:KRH34890 | ProteinID:KRH34890 |
| ProteinID:KRH34890.1 | PFAM:PF08551 | PANTHER:PTHR13377 | PANTHER:PTHR13377:SF6 | SMART:SM01160 | SUPFAM:SSF144091 |
| TMHMM:TMhelix | UniParc:UPI000233C4B0 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:44473059..44475968
Molecular Weight (calculated)
36307.6 Da
IEP (calculated)
8.035
GRAVY (calculated)
0.385
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPTKSRRLQ ILDLVSMSTP PLSVSLSQCT RLFGASGFTR LCKGLSLVLI SLHILLHLFP SAITCLALIP ARTIPFAWNL ITAGYVEQSV YGVVVSTIGL
101: LFIGKLLEPV WGPREFLKFI FIVNFLTSLC IFITAIALYC ITGQESYLYM PFSGFHGVIF GFLVGIKQIV PDQELPFLKI KVKWLPSIAL LCSIATSFWS
201: LEAASYLPTV IYGTYMSWIY LRYWQRKPET KLKGDPSEDF AFSTFFPEFL RPVIDPIASI FHRMLCGRLD ASNDAQGYTL RGEPLPGSDP IEASRRRERG
301: ARALEERLAT APSAGELETD ATEIV
101: LFIGKLLEPV WGPREFLKFI FIVNFLTSLC IFITAIALYC ITGQESYLYM PFSGFHGVIF GFLVGIKQIV PDQELPFLKI KVKWLPSIAL LCSIATSFWS
201: LEAASYLPTV IYGTYMSWIY LRYWQRKPET KLKGDPSEDF AFSTFFPEFL RPVIDPIASI FHRMLCGRLD ASNDAQGYTL RGEPLPGSDP IEASRRRERG
301: ARALEERLAT APSAGELETD ATEIV
001: MSSPGTSMFT NFTKLCKGLA LVLVVGHLVV QFIPATVPYL ALIPARTIPF AWNLITSGYF ELSVYGVVFS TVSLLFMGKF LEPVWGSTEF LKFIFVVNFL
101: TYLCVFVTAI ALYYITRLEV YLYMPFAGFH GVLAGLLVGI KQIIPDQEIL LLKIKAKWLP SIMLILSIAS SFFTLDSAAY LPTLIFGTYM GWLYLRYLQR
201: RPETKLRGDP SDDFAFSTFF PELLRPVIDP IALIFHRMLC GRSNATSEDH DYSTSGAPLP GSDSAEASRR RERGARALEE RLGTERLVPA RNKDELQSDG
301: LDNV
101: TYLCVFVTAI ALYYITRLEV YLYMPFAGFH GVLAGLLVGI KQIIPDQEIL LLKIKAKWLP SIMLILSIAS SFFTLDSAAY LPTLIFGTYM GWLYLRYLQR
201: RPETKLRGDP SDDFAFSTFF PELLRPVIDP IALIFHRMLC GRSNATSEDH DYSTSGAPLP GSDSAEASRR RERGARALEE RLGTERLVPA RNKDELQSDG
301: LDNV
Arabidopsis Description
RBL19Rhomboid-like protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF05]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.