CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
endoplasmic reticulum 3
plasma membrane 5
extracellular 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05123

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G07950.1	EES05123	AT1G27300.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0655400-01	Rice	plastid	86.03	85.76
TraesCS2B01G159600.1	Wheat	plasma membrane, plastid	83.81	84.08
TraesCS2A01G135700.1	Wheat	plasma membrane, plastid	83.49	83.76
TraesCS2D01G138200.1	Wheat	golgi	83.49	83.76
Zm00001d007067_P003	Maize	plasma membrane	93.02	78.13
EER92238	Sorghum	plastid	75.87	74.45
HORVU0Hr1G002680.2	Barley	golgi	63.49	71.43
GSMUA_Achr4P20820_001	Banana	endoplasmic reticulum, plasma membrane, plastid	72.06	71.38
GSMUA_Achr7P01900_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	68.25	67.61
VIT_13s0019g04120.t01	Wine grape	plasma membrane, plastid	63.17	63.99
Solyc04g049180.2.1	Tomato	extracellular, golgi, vacuole	48.57	63.22
KRH08383	Soybean	plasma membrane	60.0	61.97
CDY22146	Canola	plasma membrane	58.1	61.62
KRH70041	Soybean	plasma membrane	59.68	61.44
Bra040042.1-P	Field mustard	plasma membrane	58.41	60.33
CDY35975	Canola	plasma membrane	56.19	59.6
CDY28006	Canola	plasma membrane	56.19	59.6
Bra029689.1-P	Field mustard	plasma membrane	56.51	58.55
AT3G07950.1	Thale cress	plasma membrane	56.51	58.55
KRH34890	Soybean	plasma membrane	60.0	58.15
KRH75962	Soybean	endoplasmic reticulum, vacuole	24.44	53.85
KRG91881	Soybean	extracellular, golgi, plasma membrane	32.38	50.25
EES11733	Sorghum	plasma membrane	45.71	45.14

Protein Annotations

MapMan:19.4.2.6	EntrezGene:8072229	UniProt:C5X440	InterPro:DUF1751_Mem_euk	EnsemblPlants:EER99823	ProteinID:EER99823
ProteinID:EER99823.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006890	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	PFAM:PF08551	PANTHER:PTHR13377	PANTHER:PTHR13377:SF6
SMART:SM01160	EnsemblPlantsGene:SORBI_3002G399900	SUPFAM:SSF144091	unigene:Sbi.6926	TMHMM:TMhelix	UniParc:UPI0001A83DAA
RefSeq:XP_002463302.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:75080418..75084220

Molecular Weight (calculated)

34866.0 Da

IEP (calculated)

9.207

GRAVY (calculated)

0.417

Length

315 amino acids

Sequence
(BLAST)

001: MMSGSSPPAP SLPAGSGGFF RGYTKLCKGL AVILLLVHLV VQLFPSAVTY LALIPGRTIP FAWNLITAGY VEQTIPGVVV SIIGLLLFGK LLEPLWGSKE
101: LSKFIFIVNF STSACVFMTA IVLYYITQQE IYLYTPLSGF YGVLSGLLVG IKQLLPDQEL NLFLLKIKAK WIPSLVALIS IVVSFFVNDL MSYLPVLLFG
201: IYMSWIYLRY FQKRVETGLK GDPSEEFSFS SFFPEFVRPI LDPVASVFHR LLCGRSERSD ARGQTLDTSP LPGSDSIEAN RRRERGQRAL EQRLAEKLAA
301: VRSSEGTSLD AADKV

Best Arabidopsis Sequence Match ( AT3G07950.1 )
(BLAST)

001: MSSPGTSMFT NFTKLCKGLA LVLVVGHLVV QFIPATVPYL ALIPARTIPF AWNLITSGYF ELSVYGVVFS TVSLLFMGKF LEPVWGSTEF LKFIFVVNFL
101: TYLCVFVTAI ALYYITRLEV YLYMPFAGFH GVLAGLLVGI KQIIPDQEIL LLKIKAKWLP SIMLILSIAS SFFTLDSAAY LPTLIFGTYM GWLYLRYLQR
201: RPETKLRGDP SDDFAFSTFF PELLRPVIDP IALIFHRMLC GRSNATSEDH DYSTSGAPLP GSDSAEASRR RERGARALEE RLGTERLVPA RNKDELQSDG
301: LDNV

Arabidopsis Description

RBL19Rhomboid-like protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF05]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.