Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94827 | Soybean | endoplasmic reticulum, extracellular | 79.31 | 85.19 |
| KRH70160 | Soybean | extracellular | 57.47 | 58.14 |
| KRH08496 | Soybean | extracellular | 57.47 | 57.47 |
| AT5G18150.1 | Thale cress | extracellular | 48.28 | 55.26 |
| CDY53255 | Canola | extracellular | 48.28 | 53.16 |
| Bra023477.1-P | Field mustard | extracellular | 44.83 | 52.7 |
| CDX85592 | Canola | extracellular | 44.83 | 52.7 |
| Bra023476.1-P | Field mustard | extracellular | 44.83 | 52.7 |
| Solyc06g075190.1.1 | Tomato | extracellular | 57.47 | 52.63 |
| CDY38491 | Canola | extracellular | 47.13 | 52.56 |
| VIT_11s0149g00310.t01 | Wine grape | extracellular | 52.87 | 52.27 |
| CDX91042 | Canola | extracellular | 45.98 | 51.95 |
| VIT_08s0007g07390.t01 | Wine grape | extracellular | 52.87 | 51.69 |
| PGSC0003DMT400008688 | Potato | extracellular | 56.32 | 51.58 |
| CDY25454 | Canola | extracellular | 48.28 | 51.22 |
| Bra002138.1-P | Field mustard | extracellular | 48.28 | 51.22 |
| Bra006442.1-P | Field mustard | extracellular | 48.28 | 51.22 |
| CDX78780 | Canola | extracellular | 48.28 | 50.6 |
| CDX70798 | Canola | extracellular | 47.13 | 49.4 |
| AT5G14602.1 | Thale cress | extracellular | 44.83 | 48.75 |
| GSMUA_Achr10P... | Banana | extracellular | 44.83 | 47.56 |
| GSMUA_Achr6P11540_001 | Banana | extracellular | 37.93 | 40.24 |
| CDX91043 | Canola | extracellular | 41.38 | 39.13 |
| KRG98169 | Soybean | endoplasmic reticulum, extracellular | 35.63 | 34.83 |
| KRH30128 | Soybean | extracellular | 34.48 | 33.71 |
| KRH72810 | Soybean | extracellular | 35.63 | 31.31 |
| KRH17161 | Soybean | extracellular | 33.33 | 29.9 |
| CDY02643 | Canola | cytosol, golgi, nucleus | 39.08 | 27.87 |
Protein Annotations
| EMBL:ACUP02009864 | EnsemblPlants:KRH06709 | EnsemblPlantsGene:GLYMA_16G041100 | PANTHER:PTHR34132 | PANTHER:PTHR34132:SF1 | ProteinID:KRH06709 |
| ProteinID:KRH06709.1 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000233EBE9 | UniProt:I1ML24 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr16:-:3856191..3857163
Molecular Weight (calculated)
10112.1 Da
IEP (calculated)
9.214
GRAVY (calculated)
-0.190
Length
87 amino acids
Sequence
(BLAST)
(BLAST)
1: MCPLRFILIF FSTMLAAYIA WTTMTSSPEI DFTTQDRENK ASSNKDHFNF IKMIQNGFWV FVDMASGGYL WRNLKSRNDG VREVKSS
1: MCPMRFLLVF FSAVLAGYFA WKTVSSSPEF DSPDELNEKQ ELNLKKKMEN GFWVFVDMAS GRYLWRNLKE MREKSQ
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FK55]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.