CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
cytosol 1
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30128	Soybean	extracellular	94.38	94.38
AT5G58375.1	Thale cress	extracellular	56.18	58.82
CDX88672	Canola	extracellular	53.93	56.47
Bra002655.1-P	Field mustard	extracellular	55.06	56.32
CDY43858	Canola	extracellular	55.06	56.32
CDY70047	Canola	extracellular	55.06	56.32
Bra006770.1-P	Field mustard	extracellular	53.93	55.81
GSMUA_Achr7P22160_001	Banana	extracellular	51.69	52.87
CDY71001	Canola	extracellular	51.69	52.27
KRH72810	Soybean	extracellular	57.3	51.52
GSMUA_Achr11P...	Banana	extracellular	48.31	51.19
GSMUA_Achr4P00210_001	Banana	extracellular	49.44	50.57
Zm00001d044691_P001	Maize	extracellular, golgi	48.31	50.0
TraesCS5D01G144700.1	Wheat	extracellular	49.44	50.0
TraesCS5A01G148100.1	Wheat	extracellular	49.44	50.0
EES16622	Sorghum	extracellular, golgi	49.44	50.0
HORVU5Hr1G046850.2	Barley	extracellular	49.44	50.0
TraesCS5B01G146600.1	Wheat	extracellular	48.31	48.86
Zm00001d023366_P001	Maize	extracellular, golgi	48.31	47.78
KRH17161	Soybean	extracellular	51.69	47.42
Os11t0113300-01	Rice	extracellular, golgi	47.19	47.19
VIT_06s0004g07850.t01	Wine grape	golgi	60.67	45.38
KRH70160	Soybean	extracellular	43.82	45.35
GSMUA_Achr11P...	Banana	extracellular	43.82	45.35
TraesCS4A01G195200.1	Wheat	extracellular	49.44	44.0
TraesCS4D01G118300.1	Wheat	extracellular	49.44	44.0
TraesCS4B01G120200.1	Wheat	extracellular	49.44	44.0
KRH08496	Soybean	extracellular	40.45	41.38
KRG94827	Soybean	endoplasmic reticulum, extracellular	34.83	38.27
KRH06709	Soybean	endoplasmic reticulum, extracellular	34.83	35.63
Os12t0112800-00	Rice	extracellular, golgi	48.31	32.58
HORVU4Hr1G022580.2	Barley	extracellular	35.96	27.35

Protein Annotations

EMBL:ACUP02010850	EMBL:BT090824	EnsemblPlants:KRG98169	EnsemblPlantsGene:GLYMA_18G054800	EntrezGene:100306619	PANTHER:PTHR34132
PANTHER:PTHR34132:SF2	ProteinID:KRG98169	ProteinID:KRG98169.1	SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0001B152F5	UniProt:C6T071	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:4765857..4766511

Molecular Weight (calculated)

9872.8 Da

IEP (calculated)

9.366

GRAVY (calculated)

-0.051

Length

89 amino acids

Sequence
(BLAST)

1: MCPLRLILIF LSATLAGFFV LRNLRSQPQI EEDDAVVPPN PKISDSSDAS SNGTSKVRAV VESGFWTFVD MASGRYLWRH LVSNSSKRS

Best Arabidopsis Sequence Match ( AT5G58375.1 )
(BLAST)

1: MCPLRLILIF LSATLAGFFV LQKLNSTSDD PLDDSFTDAE HADDDSVSGF SKVGMAMKSG FWTCVDMASG RYLWNNLCSN AKRSS

Arabidopsis Description

At5g58375 [Source:UniProtKB/TrEMBL;Acc:Q7XA76]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.