Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G118300.1 | Wheat | extracellular | 52.14 | 61.0 |
| TraesCS4B01G120200.1 | Wheat | extracellular | 51.28 | 60.0 |
| TraesCS4A01G195200.1 | Wheat | extracellular | 51.28 | 60.0 |
| Zm00001d044691_P001 | Maize | extracellular, golgi | 39.32 | 53.49 |
| HORVU5Hr1G046850.2 | Barley | extracellular | 38.46 | 51.14 |
| Zm00001d023366_P001 | Maize | extracellular, golgi | 39.32 | 51.11 |
| EES16622 | Sorghum | extracellular, golgi | 37.61 | 50.0 |
| GSMUA_Achr7P22160_001 | Banana | extracellular | 29.91 | 40.23 |
| CDX88672 | Canola | extracellular | 29.06 | 40.0 |
| CDY71001 | Canola | extracellular | 29.91 | 39.77 |
| Bra006770.1-P | Field mustard | extracellular | 29.06 | 39.53 |
| GSMUA_Achr4P00210_001 | Banana | extracellular | 29.06 | 39.08 |
| AT5G58375.1 | Thale cress | extracellular | 28.21 | 38.82 |
| GSMUA_Achr11P... | Banana | extracellular | 28.21 | 38.37 |
| CDY70047 | Canola | extracellular | 28.21 | 37.93 |
| CDY43858 | Canola | extracellular | 28.21 | 37.93 |
| Bra002655.1-P | Field mustard | extracellular | 28.21 | 37.93 |
| KRG98169 | Soybean | endoplasmic reticulum, extracellular | 27.35 | 35.96 |
| GSMUA_Achr11P... | Banana | extracellular | 25.64 | 35.71 |
| KRH30128 | Soybean | extracellular | 25.64 | 33.71 |
| KRH72810 | Soybean | extracellular | 25.64 | 30.3 |
| VIT_06s0004g07850.t01 | Wine grape | golgi | 29.06 | 28.57 |
| KRH17161 | Soybean | extracellular | 23.08 | 27.84 |
Protein Annotations
| EMBL:AK366675 | EnsemblPlants:HORVU4Hr1G022580.2 | EnsemblPlantsGene:HORVU4Hr1G022580 | PANTHER:PTHR34132 | PANTHER:PTHR34132:SF2 | SEG:seg |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0002007462 | UniProt:F2DS07 | MapMan:35.2 | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DS07]
Coordinates
chrchr4H:-:119346609..119349137
Molecular Weight (calculated)
12504.2 Da
IEP (calculated)
4.063
GRAVY (calculated)
0.570
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MCPLRVILIF LSATIAGFFL LRGLNAEPDL FQDDAAAAVA GNDDDDDEGS PREPAPLHSK VLLLSCCCLF PISPHICAIV AANSWPCVLF IIYKDYLGLC
101: NISTTTSNEI MPVSCAG
101: NISTTTSNEI MPVSCAG
1: MCPLRLILIF LSATLAGFFV LQKLNSTSDD PLDDSFTDAE HADDDSVSGF SKVGMAMKSG FWTCVDMASG RYLWNNLCSN AKRSS
Arabidopsis Description
At5g58375 [Source:UniProtKB/TrEMBL;Acc:Q7XA76]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.