Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G195200.1 | Wheat | extracellular | 98.0 | 98.0 |
| TraesCS4B01G120200.1 | Wheat | extracellular | 96.0 | 96.0 |
| TraesCS5D01G144700.1 | Wheat | extracellular | 72.0 | 81.82 |
| EES16622 | Sorghum | extracellular, golgi | 72.0 | 81.82 |
| Zm00001d023366_P001 | Maize | extracellular, golgi | 71.0 | 78.89 |
| Zm00001d044691_P001 | Maize | extracellular, golgi | 66.0 | 76.74 |
| GSMUA_Achr11P... | Banana | extracellular | 50.0 | 58.14 |
| GSMUA_Achr4P00210_001 | Banana | extracellular | 50.0 | 57.47 |
| GSMUA_Achr11P... | Banana | extracellular | 48.0 | 57.14 |
| GSMUA_Achr7P22160_001 | Banana | extracellular | 47.0 | 54.02 |
| CDY71001 | Canola | extracellular | 47.0 | 53.41 |
| CDX88672 | Canola | extracellular | 45.0 | 52.94 |
| Bra006770.1-P | Field mustard | extracellular | 45.0 | 52.33 |
| HORVU4Hr1G022580.2 | Barley | extracellular | 61.0 | 52.14 |
| AT5G58375.1 | Thale cress | extracellular | 44.0 | 51.76 |
| CDY70047 | Canola | extracellular | 45.0 | 51.72 |
| CDY43858 | Canola | extracellular | 45.0 | 51.72 |
| Bra002655.1-P | Field mustard | extracellular | 45.0 | 51.72 |
| KRG98169 | Soybean | endoplasmic reticulum, extracellular | 44.0 | 49.44 |
| KRH30128 | Soybean | extracellular | 42.0 | 47.19 |
| KRH72810 | Soybean | extracellular | 41.0 | 41.41 |
| VIT_06s0004g07850.t01 | Wine grape | golgi | 49.0 | 41.18 |
| KRH17161 | Soybean | extracellular | 37.0 | 38.14 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G118300.1 | EnsemblPlantsGene:TraesCS4D01G118300 | PANTHER:PTHR34132 | PANTHER:PTHR34132:SF2 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:98931210..98934169
Molecular Weight (calculated)
10707.7 Da
IEP (calculated)
4.529
GRAVY (calculated)
-0.093
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MCPLRVILIF LSATIAGFFL LRGLNAEPDL FQDDDAAAVA ANDDDDEGSP GSPRDPAPLH SKVASAAKTG FWTMVDMASG RYLWRTLVAP PAKSDSEKAR
1: MCPLRFVLVF FSAVLAGYIA WRTVNSTPEL FSDELLQAEA KEKQGLDFKR KMDNGLWTFV DMASGRYLWR NLKEMRQRSQ
Arabidopsis Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Methyltransferase-related protein (TAIR:AT5G18150.1); Has 30201 Blast hits to 17322 prote /.../ 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G14602]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.