CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70047	Canola	extracellular	96.55	96.55
CDY71001	Canola	extracellular	85.06	84.09
CDX88672	Canola	extracellular	74.71	76.47
AT5G58375.1	Thale cress	extracellular	71.26	72.94
KRG98169	Soybean	endoplasmic reticulum, extracellular	56.32	55.06
EES16622	Sorghum	extracellular, golgi	51.72	51.14
Os11t0113300-01	Rice	extracellular, golgi	51.72	50.56
KRH30128	Soybean	extracellular	51.72	50.56
Zm00001d044691_P001	Maize	extracellular, golgi	49.43	50.0
TraesCS5D01G144700.1	Wheat	extracellular	50.57	50.0
TraesCS5B01G146600.1	Wheat	extracellular	50.57	50.0
TraesCS5A01G148100.1	Wheat	extracellular	50.57	50.0
HORVU5Hr1G046850.2	Barley	extracellular	50.57	50.0
GSMUA_Achr7P22160_001	Banana	extracellular	48.28	48.28
GSMUA_Achr4P00210_001	Banana	extracellular	48.28	48.28
Zm00001d023366_P001	Maize	extracellular, golgi	49.43	47.78
GSMUA_Achr11P...	Banana	extracellular	45.98	47.62
TraesCS4A01G195200.1	Wheat	extracellular	51.72	45.0
TraesCS4B01G120200.1	Wheat	extracellular	51.72	45.0
TraesCS4D01G118300.1	Wheat	extracellular	51.72	45.0
CDY53255	Canola	extracellular	40.23	44.3
CDY25454	Canola	extracellular	41.38	43.9
VIT_06s0004g07850.t01	Wine grape	golgi	59.77	43.7
CDY38491	Canola	extracellular	39.08	43.59
KRH72810	Soybean	extracellular	49.43	43.43
CDX85592	Canola	extracellular	36.78	43.24
GSMUA_Achr11P...	Banana	extracellular	42.53	43.02
CDX70798	Canola	extracellular	40.23	42.17
CDX78780	Canola	extracellular	40.23	42.17
CDX91042	Canola	extracellular	35.63	40.26
KRH17161	Soybean	extracellular	44.83	40.21
Os12t0112800-00	Rice	extracellular, golgi	50.57	33.33
CDX91043	Canola	extracellular	32.18	30.43
HORVU4Hr1G022580.2	Barley	extracellular	37.93	28.21
CDY02643	Canola	cytosol, golgi, nucleus	31.03	22.13

Protein Annotations

EnsemblPlants:CDY43858	EnsemblPlantsGene:GSBRNA2T00077403001	PANTHER:PTHR34132	PANTHER:PTHR34132:SF2	ProteinID:CDY43858	ProteinID:CDY43858.1
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0004EE5980	UniProt:A0A078I411	MapMan:35.2	:

Description

BnaC09g33850DBnaC09g33850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I411]

Coordinates

chrLK032571:-:12806..13458

Molecular Weight (calculated)

9586.4 Da

IEP (calculated)

4.889

GRAVY (calculated)

-0.008

Length

87 amino acids

Sequence
(BLAST)

1: MCPLRLILIF LSATLAGFFV LKKLNTSYDD PLADPLTEAD PVDADSDSNS RFSKVGMAMK SGFWTCVDMA SGRYLWNHLC SNSDKSS

Best Arabidopsis Sequence Match ( AT5G58375.1 )
(BLAST)

1: MCPLRLILIF LSATLAGFFV LQKLNSTSDD PLDDSFTDAE HADDDSVSGF SKVGMAMKSG FWTCVDMASG RYLWNNLCSN AKRSS

Arabidopsis Description

At5g58375 [Source:UniProtKB/TrEMBL;Acc:Q7XA76]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.