Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70047 | Canola | extracellular | 84.09 | 85.06 |
| CDY43858 | Canola | extracellular | 84.09 | 85.06 |
| CDX88672 | Canola | extracellular | 77.27 | 80.0 |
| AT5G58375.1 | Thale cress | extracellular | 68.18 | 70.59 |
| HORVU5Hr1G046850.2 | Barley | extracellular | 52.27 | 52.27 |
| TraesCS5D01G144700.1 | Wheat | extracellular | 52.27 | 52.27 |
| TraesCS5A01G148100.1 | Wheat | extracellular | 52.27 | 52.27 |
| EES16622 | Sorghum | extracellular, golgi | 52.27 | 52.27 |
| KRG98169 | Soybean | endoplasmic reticulum, extracellular | 52.27 | 51.69 |
| Os11t0113300-01 | Rice | extracellular, golgi | 52.27 | 51.69 |
| Zm00001d044691_P001 | Maize | extracellular, golgi | 50.0 | 51.16 |
| TraesCS5B01G146600.1 | Wheat | extracellular | 51.14 | 51.14 |
| Zm00001d023366_P001 | Maize | extracellular, golgi | 50.0 | 48.89 |
| KRH30128 | Soybean | extracellular | 47.73 | 47.19 |
| GSMUA_Achr4P00210_001 | Banana | extracellular | 46.59 | 47.13 |
| TraesCS4A01G195200.1 | Wheat | extracellular | 53.41 | 47.0 |
| TraesCS4B01G120200.1 | Wheat | extracellular | 53.41 | 47.0 |
| TraesCS4D01G118300.1 | Wheat | extracellular | 53.41 | 47.0 |
| GSMUA_Achr7P22160_001 | Banana | extracellular | 45.45 | 45.98 |
| GSMUA_Achr11P... | Banana | extracellular | 43.18 | 45.24 |
| CDX85592 | Canola | extracellular | 37.5 | 44.59 |
| CDY53255 | Canola | extracellular | 39.77 | 44.3 |
| CDY25454 | Canola | extracellular | 40.91 | 43.9 |
| CDY38491 | Canola | extracellular | 38.64 | 43.59 |
| VIT_06s0004g07850.t01 | Wine grape | golgi | 57.95 | 42.86 |
| CDX78780 | Canola | extracellular | 39.77 | 42.17 |
| CDX70798 | Canola | extracellular | 39.77 | 42.17 |
| GSMUA_Achr11P... | Banana | extracellular | 40.91 | 41.86 |
| CDX91042 | Canola | extracellular | 36.36 | 41.56 |
| KRH72810 | Soybean | extracellular | 45.45 | 40.4 |
| KRH17161 | Soybean | extracellular | 43.18 | 39.18 |
| Os12t0112800-00 | Rice | extracellular, golgi | 53.41 | 35.61 |
| CDX91043 | Canola | extracellular | 32.95 | 31.52 |
| HORVU4Hr1G022580.2 | Barley | extracellular | 39.77 | 29.91 |
| CDY02643 | Canola | cytosol, golgi, nucleus | 30.68 | 22.13 |
Protein Annotations
| EnsemblPlants:CDY71001 | EnsemblPlantsGene:GSBRNA2T00010540001 | PANTHER:PTHR34132 | PANTHER:PTHR34132:SF2 | ProteinID:CDY71001 | ProteinID:CDY71001.1 |
| SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EBEAA1 | UniProt:A0A078JZI6 | MapMan:35.2 |
Description
BnaUnng04130DBnaUnng04130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JZI6]
Coordinates
chrLK044088:-:2227..2861
Molecular Weight (calculated)
9680.3 Da
IEP (calculated)
4.231
GRAVY (calculated)
-0.082
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MCPLRLILIF FSATLAGFFV LKKLNNSYDD PLADPLTDDA DPADADSDSD SRFSKVGMAM KTGFWTCVDM ASGRYLWNHL CSNSDSSS
1: MCPLRLILIF LSATLAGFFV LQKLNSTSDD PLDDSFTDAE HADDDSVSGF SKVGMAMKSG FWTCVDMASG RYLWNNLCSN AKRSS
Arabidopsis Description
At5g58375 [Source:UniProtKB/TrEMBL;Acc:Q7XA76]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.