Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85592 | Canola | extracellular | 77.92 | 81.08 |
| CDX91043 | Canola | extracellular | 83.12 | 69.57 |
| CDY25454 | Canola | extracellular | 67.53 | 63.41 |
| CDY53255 | Canola | extracellular | 64.94 | 63.29 |
| CDY38491 | Canola | extracellular | 63.64 | 62.82 |
| CDX78780 | Canola | extracellular | 66.23 | 61.45 |
| CDX70798 | Canola | extracellular | 64.94 | 60.24 |
| AT5G14602.1 | Thale cress | extracellular | 62.34 | 60.0 |
| VIT_11s0149g00310.t01 | Wine grape | extracellular | 59.74 | 52.27 |
| VIT_08s0007g07390.t01 | Wine grape | extracellular | 59.74 | 51.69 |
| KRH70160 | Soybean | extracellular | 57.14 | 51.16 |
| KRG94827 | Soybean | endoplasmic reticulum, extracellular | 51.95 | 49.38 |
| PGSC0003DMT400008688 | Potato | extracellular | 58.44 | 47.37 |
| Solyc06g075190.1.1 | Tomato | extracellular | 58.44 | 47.37 |
| KRH08496 | Soybean | extracellular | 53.25 | 47.13 |
| KRH06709 | Soybean | endoplasmic reticulum, extracellular | 51.95 | 45.98 |
| GSMUA_Achr10P... | Banana | extracellular | 48.05 | 45.12 |
| GSMUA_Achr6P11540_001 | Banana | extracellular | 44.16 | 41.46 |
| CDY02643 | Canola | cytosol, golgi, nucleus | 62.34 | 39.34 |
| CDX88672 | Canola | extracellular | 41.56 | 37.65 |
| CDY71001 | Canola | extracellular | 41.56 | 36.36 |
| CDY43858 | Canola | extracellular | 40.26 | 35.63 |
| CDY70047 | Canola | extracellular | 40.26 | 35.63 |
Protein Annotations
| EnsemblPlants:CDX91042 | EnsemblPlantsGene:GSBRNA2T00151810001 | PANTHER:PTHR34132 | PANTHER:PTHR34132:SF1 | ProteinID:CDX91042 | ProteinID:CDX91042.1 |
| SignalP:SignalP-noTM | UniParc:UPI0004EB1A2B | MapMan:35.2 | : | : | : |
Description
BnaC02g05550D
Coordinates
chrLK031865:-:480632..480865
Molecular Weight (calculated)
8992.9 Da
IEP (calculated)
8.747
GRAVY (calculated)
-0.130
Length
77 amino acids
Sequence
(BLAST)
(BLAST)
1: MCPLRFVLVF FSVALARYFA WKTVDSSLEL NSEDSPVEAK EKDDNQGLGF KRKMCNGFWM FVDMASGRYL WRNLKSI
1: MCPLRLILIF LSATLAGFFV LQKLNSTSDD PLDDSFTDAE HADDDSVSGF SKVGMAMKSG FWTCVDMASG RYLWNNLCSN AKRSS
Arabidopsis Description
At5g58375 [Source:UniProtKB/TrEMBL;Acc:Q7XA76]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.