CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006770.1-P	Field mustard	extracellular	89.41	88.37
AT5G58375.1	Thale cress	extracellular	77.65	77.65
CDY71001	Canola	extracellular	80.0	77.27
CDY43858	Canola	extracellular	76.47	74.71
CDY70047	Canola	extracellular	76.47	74.71
KRG98169	Soybean	endoplasmic reticulum, extracellular	56.47	53.93
TraesCS5D01G144700.1	Wheat	extracellular	52.94	51.14
TraesCS5A01G148100.1	Wheat	extracellular	52.94	51.14
HORVU5Hr1G046850.2	Barley	extracellular	52.94	51.14
KRH30128	Soybean	extracellular	52.94	50.56
TraesCS5B01G146600.1	Wheat	extracellular	51.76	50.0
GSMUA_Achr4P00210_001	Banana	extracellular	50.59	49.43
EES16622	Sorghum	extracellular, golgi	50.59	48.86
Zm00001d044691_P001	Maize	extracellular, golgi	49.41	48.84
Zm00001d023366_P001	Maize	extracellular, golgi	50.59	47.78
Os11t0113300-01	Rice	extracellular, golgi	49.41	47.19
GSMUA_Achr7P22160_001	Banana	extracellular	47.06	45.98
CDY53255	Canola	extracellular	42.35	45.57
GSMUA_Achr11P...	Banana	extracellular	44.71	45.24
TraesCS4D01G118300.1	Wheat	extracellular	52.94	45.0
CDX85592	Canola	extracellular	38.82	44.59
VIT_06s0004g07850.t01	Wine grape	golgi	62.35	44.54
KRH17161	Soybean	extracellular	50.59	44.33
GSMUA_Achr11P...	Banana	extracellular	44.71	44.19
TraesCS4B01G120200.1	Wheat	extracellular	51.76	44.0
TraesCS4A01G195200.1	Wheat	extracellular	51.76	44.0
CDY38491	Canola	extracellular	40.0	43.59
CDY25454	Canola	extracellular	41.18	42.68
KRH72810	Soybean	extracellular	49.41	42.42
CDX91042	Canola	extracellular	37.65	41.56
CDX78780	Canola	extracellular	40.0	40.96
CDX70798	Canola	extracellular	40.0	40.96
Os12t0112800-00	Rice	extracellular, golgi	50.59	32.58
CDX91043	Canola	extracellular	34.12	31.52
HORVU4Hr1G022580.2	Barley	extracellular	40.0	29.06
CDY02643	Canola	cytosol, golgi, nucleus	32.94	22.95

Protein Annotations

EnsemblPlants:CDX88672	EnsemblPlantsGene:GSBRNA2T00148716001	PANTHER:PTHR34132	PANTHER:PTHR34132:SF2	ProteinID:CDX88672	ProteinID:CDX88672.1
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EDB68B	MapMan:35.2	:	:

Description

BnaA03g09770D

Coordinates

chrLK031856:+:414766..415354

Molecular Weight (calculated)

9354.1 Da

IEP (calculated)

4.868

GRAVY (calculated)

-0.021

Length

85 amino acids

Sequence
(BLAST)

1: MCPLRLILIF LSATLAGFFV LKKLNNSYDD PLADPLTDVD PADADSDSRF SKVGKAMKTG FWTCVDMASG RYLWNHLCSN SDSSS

Best Arabidopsis Sequence Match ( AT5G58375.1 )
(BLAST)

1: MCPLRLILIF LSATLAGFFV LQKLNSTSDD PLDDSFTDAE HADDDSVSGF SKVGMAMKSG FWTCVDMASG RYLWNNLCSN AKRSS

Arabidopsis Description

At5g58375 [Source:UniProtKB/TrEMBL;Acc:Q7XA76]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.