Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G144700.1 | Wheat | extracellular | 89.77 | 89.77 |
| TraesCS5A01G148100.1 | Wheat | extracellular | 88.64 | 88.64 |
| HORVU5Hr1G046850.2 | Barley | extracellular | 88.64 | 88.64 |
| EES16622 | Sorghum | extracellular, golgi | 77.27 | 77.27 |
| Zm00001d023366_P001 | Maize | extracellular, golgi | 76.14 | 74.44 |
| Zm00001d044691_P001 | Maize | extracellular, golgi | 70.45 | 72.09 |
| Os11t0113300-01 | Rice | extracellular, golgi | 72.73 | 71.91 |
| TraesCS4B01G120200.1 | Wheat | extracellular | 75.0 | 66.0 |
| GSMUA_Achr11P... | Banana | extracellular | 53.41 | 54.65 |
| GSMUA_Achr11P... | Banana | extracellular | 51.14 | 53.57 |
| AT5G58375.1 | Thale cress | extracellular | 51.14 | 52.94 |
| GSMUA_Achr4P00210_001 | Banana | extracellular | 52.27 | 52.87 |
| Bra006770.1-P | Field mustard | extracellular | 51.14 | 52.33 |
| CDX88672 | Canola | extracellular | 50.0 | 51.76 |
| GSMUA_Achr7P22160_001 | Banana | extracellular | 51.14 | 51.72 |
| CDY71001 | Canola | extracellular | 51.14 | 51.14 |
| CDY70047 | Canola | extracellular | 50.0 | 50.57 |
| Bra002655.1-P | Field mustard | extracellular | 50.0 | 50.57 |
| CDY43858 | Canola | extracellular | 50.0 | 50.57 |
| Os12t0112800-00 | Rice | extracellular, golgi | 72.73 | 48.48 |
| KRG98169 | Soybean | endoplasmic reticulum, extracellular | 48.86 | 48.31 |
| KRH30128 | Soybean | extracellular | 46.59 | 46.07 |
| VIT_06s0004g07850.t01 | Wine grape | golgi | 53.41 | 39.5 |
| KRH72810 | Soybean | extracellular | 43.18 | 38.38 |
| KRH17161 | Soybean | extracellular | 40.91 | 37.11 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G146600.1 | EnsemblPlantsGene:TraesCS5B01G146600 | PANTHER:PTHR34132 | PANTHER:PTHR34132:SF2 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:275057443..275058100
Molecular Weight (calculated)
9462.3 Da
IEP (calculated)
5.750
GRAVY (calculated)
0.127
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MCPLRVILIF LSATVAGFFL LQGLNADTDC FRDGDEGSES PTAAVPLHSK VGSAVKTGFW TTVDMASGRY LWRTLVAPPV NSESDKAR
1: MCPLRLILIF LSATLAGFFV LQKLNSTSDD PLDDSFTDAE HADDDSVSGF SKVGMAMKSG FWTCVDMASG RYLWNNLCSN AKRSS
Arabidopsis Description
At5g58375 [Source:UniProtKB/TrEMBL;Acc:Q7XA76]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.