Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85592 | Canola | extracellular | 100.0 | 100.0 |
| Bra023476.1-P | Field mustard | extracellular | 95.95 | 95.95 |
| Bra002138.1-P | Field mustard | extracellular | 70.27 | 63.41 |
| Bra006442.1-P | Field mustard | extracellular | 70.27 | 63.41 |
| AT5G14602.1 | Thale cress | extracellular | 67.57 | 62.5 |
| KRH70160 | Soybean | extracellular | 63.51 | 54.65 |
| VIT_08s0007g07390.t01 | Wine grape | extracellular | 64.86 | 53.93 |
| VIT_11s0149g00310.t01 | Wine grape | extracellular | 63.51 | 53.41 |
| KRH08496 | Soybean | extracellular | 62.16 | 52.87 |
| KRG94827 | Soybean | endoplasmic reticulum, extracellular | 52.7 | 48.15 |
| GSMUA_Achr10P... | Banana | extracellular | 51.35 | 46.34 |
| Solyc06g075190.1.1 | Tomato | extracellular | 58.11 | 45.26 |
| KRH06709 | Soybean | endoplasmic reticulum, extracellular | 52.7 | 44.83 |
| PGSC0003DMT400008688 | Potato | extracellular | 56.76 | 44.21 |
| GSMUA_Achr6P11540_001 | Banana | extracellular | 47.3 | 42.68 |
| Bra006770.1-P | Field mustard | extracellular | 43.24 | 37.21 |
| Bra002655.1-P | Field mustard | extracellular | 43.24 | 36.78 |
Protein Annotations
Description
AT5G18150 (E=4e-026) | unknown protein
Coordinates
chrA02:+:3530011..3530235
Molecular Weight (calculated)
8689.6 Da
IEP (calculated)
9.609
GRAVY (calculated)
-0.107
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MCPLRFVIVF FSVVLAGYFT WKTVDSSPEL DSPVEPKEKD DKQGLGFKRK MYNGFWMFVD MASGRYLWRN LKAI
1: MCPMRFLLVF FSAVLAGYFA WKTVSSSPEF DSPDELNEKQ ELNLKKKMEN GFWVFVDMAS GRYLWRNLKE MREKSQ
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FK55]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.