Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G44550.1 | KRH22653 | AT5G22290.1 | 21798944 |
| AT5G44550.1 | KRH26664 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37705 | Soybean | extracellular, plasma membrane, plastid, vacuole | 84.08 | 89.42 |
| KRH43078 | Soybean | peroxisome, plasma membrane, plastid, vacuole | 68.66 | 71.13 |
| KRH59207 | Soybean | extracellular, plasma membrane, vacuole | 69.65 | 60.09 |
| Solyc02g069730.2.1 | Tomato | plasma membrane | 53.23 | 54.87 |
| PGSC0003DMT400054615 | Potato | plasma membrane | 53.23 | 53.77 |
| VIT_10s0092g00220.t01 | Wine grape | cytosol, plasma membrane, vacuole | 53.73 | 52.94 |
| Bra033751.1-P | Field mustard | plasma membrane | 48.26 | 50.52 |
| AT5G44550.1 | Thale cress | plasma membrane | 48.76 | 49.75 |
| CDY49491 | Canola | plasma membrane | 48.76 | 49.25 |
| CDY49020 | Canola | plasma membrane | 48.76 | 49.25 |
| AT4G20390.1 | Thale cress | extracellular, mitochondrion, plasma membrane, vacuole | 48.26 | 49.24 |
| CDY63706 | Canola | endoplasmic reticulum, plasma membrane, plastid | 47.76 | 48.48 |
| CDY14930 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 47.76 | 48.48 |
| Bra039516.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 47.76 | 48.48 |
| CDX76458 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 47.76 | 48.24 |
| CDY31439 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 45.77 | 46.23 |
| GSMUA_Achr7P08030_001 | Banana | plasma membrane | 42.79 | 42.36 |
| TraesCS5D01G059600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 39.3 | 40.31 |
| TraesCS5A01G049000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 39.3 | 40.31 |
| Os12t0610800-01 | Rice | plasma membrane | 38.81 | 40.0 |
| TraesCS5B01G054100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 38.31 | 39.29 |
| EES17365 | Sorghum | plastid | 39.3 | 37.44 |
| Zm00001d031047_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 35.82 | 35.12 |
| KRH50920 | Soybean | cytosol, plasma membrane, vacuole | 29.85 | 31.91 |
| KRH02204 | Soybean | cytosol, plasma membrane, vacuole | 28.86 | 31.02 |
| KRH25574 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 24.38 | 30.06 |
| KRH50041 | Soybean | plasma membrane | 23.38 | 29.38 |
| KRH55963 | Soybean | extracellular | 23.38 | 28.83 |
| KRH06871 | Soybean | endoplasmic reticulum, plasma membrane | 22.89 | 28.57 |
| KRH11251 | Soybean | plasma membrane | 28.36 | 28.22 |
| KRG96380 | Soybean | plasma membrane | 25.87 | 26.53 |
| KRH68112 | Soybean | plasma membrane | 24.88 | 25.91 |
| KRG94650 | Soybean | plasma membrane | 23.88 | 24.37 |
| KRH02202 | Soybean | golgi, plasma membrane, vacuole | 23.38 | 24.35 |
| KRH17069 | Soybean | extracellular, plasma membrane, vacuole | 19.4 | 23.35 |
| KRH21024 | Soybean | cytosol, plasma membrane, vacuole | 21.39 | 22.75 |
| KRH72716 | Soybean | extracellular | 15.92 | 22.7 |
| KRH50921 | Soybean | plasma membrane | 21.39 | 22.28 |
Protein Annotations
| EntrezGene:100792043 | MapMan:35.1 | EMBL:ACUP02009380 | InterPro:CASP/CASPL | InterPro:CASP_dom | EnsemblPlantsGene:GLYMA_15G191800 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0051536 | UniProt:K7MCE9 | EnsemblPlants:KRH12746 | ProteinID:KRH12746 | ProteinID:KRH12746.1 |
| PFAM:PF04535 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF120 | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI000233B17A |
Description
hypothetical protein
Coordinates
chr15:-:20791211..20792732
Molecular Weight (calculated)
21795.9 Da
IEP (calculated)
9.996
GRAVY (calculated)
0.399
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MASENGEKVE IGLNAVPQET HKPKKDWVLL SLRMVAFFAT ASATLVMTFN KQTKSFVVAT VGSTPITATL AAKFNQTPAF VFFVIANGNA SLHNLVMIVM
101: EVLGPRYDYK GLRLALIAIL DMMTMALASA GDGAATFMSE LGKNGNSHAR WDKICDKFET YCNRGGAALI VSFVGFILLF IISVMSVIKL LKSNRINHAS
201: P
101: EVLGPRYDYK GLRLALIAIL DMMTMALASA GDGAATFMSE LGKNGNSHAR WDKICDKFET YCNRGGAALI VSFVGFILLF IISVMSVIKL LKSNRINHAS
201: P
001: MAVSKLTLAA TSGKSCKILL GLRLLAFSAT LSAAIVMGLN KETKTFIVGK VGNTPIQATF TAKFDHTPAF VFFVVANAMV SFHNLLMIAL QIFGGKMEFT
101: GFRLLSVAIL DMLNVTLISA AANAAAFMAE VGKNGNKHAR WDKICDRFAT YCDHGAGALI AAFAGVILML IISAASISRL VQPNKCCSTT ASPSVVP
101: GFRLLSVAIL DMLNVTLISA AANAAAFMAE VGKNGNKHAR WDKICDRFAT YCDHGAGALI AAFAGVILML IISAASISRL VQPNKCCSTT ASPSVVP
Arabidopsis Description
CASP-like protein 1B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI10]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.