CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, plasma membrane, endoplasmic reticulum, mitochondrion

Predictor Summary:

plastid 2
endoplasmic reticulum 2
extracellular 1
golgi 1
plasma membrane 2
vacuole 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76458	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	95.98	95.98
AT4G20390.1	Thale cress	extracellular, mitochondrion, plasma membrane, vacuole	79.4	80.2
CDY49491	Canola	plasma membrane	68.34	68.34
CDY49020	Canola	plasma membrane	67.84	67.84
CDY63706	Canola	endoplasmic reticulum, plasma membrane, plastid	67.34	67.68
CDY14930	Canola	endoplasmic reticulum, plasma membrane, vacuole	67.34	67.68
Solyc02g069730.2.1	Tomato	plasma membrane	48.24	49.23
VIT_10s0092g00220.t01	Wine grape	cytosol, plasma membrane, vacuole	50.25	49.02
KRH37705	Soybean	extracellular, plasma membrane, plastid, vacuole	46.23	48.68
PGSC0003DMT400054615	Potato	plasma membrane	46.73	46.73
KRH43078	Soybean	peroxisome, plasma membrane, plastid, vacuole	44.72	45.88
KRH12746	Soybean	cytosol, plasma membrane, vacuole	46.23	45.77
KRH59207	Soybean	extracellular, plasma membrane, vacuole	46.23	39.48
Os12t0610800-01	Rice	plasma membrane	37.69	38.46
GSMUA_Achr7P08030_001	Banana	plasma membrane	39.2	38.42
Zm00001d031047_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	37.69	36.59
EES17365	Sorghum	plastid	38.69	36.49
TraesCS5B01G054100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	35.68	36.22
TraesCS5D01G059600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	34.67	35.2
TraesCS5A01G049000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	34.67	35.2
CDY21972	Canola	extracellular, plasma membrane	28.14	34.15
CDY48566	Canola	extracellular, plasma membrane	27.64	33.54
CDX89875	Canola	extracellular, plasma membrane, vacuole	27.14	32.93
CDY18177	Canola	extracellular, plasma membrane, vacuole	27.14	32.93
CDY70062	Canola	extracellular	17.09	28.33
CDY09750	Canola	plasma membrane	26.63	27.46
CDX90580	Canola	plasma membrane	26.63	27.46
CDY22743	Canola	plasma membrane	25.13	26.32
CDY09075	Canola	plasma membrane	24.62	25.79
CDX90578	Canola	plasma membrane	24.12	25.26
CDY09749	Canola	plasma membrane	24.12	25.26
CDY03385	Canola	plasma membrane	21.11	24.85
CDY08965	Canola	extracellular, plasma membrane, vacuole	14.57	24.58
CDY34336	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.1	23.67
CDY05260	Canola	plasma membrane	24.12	23.41
CDX76993	Canola	plasma membrane	24.12	23.41
CDY24696	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.62	22.93
CDX92668	Canola	extracellular, plasma membrane, vacuole	18.59	21.76
CDY11050	Canola	cytosol	14.57	21.01

Protein Annotations

MapMan:35.1	GO:A0A078H1X9	UniProt:A0A078H1X9	InterPro:CASP/CASPL	InterPro:CASP_dom	EnsemblPlants:CDY31439
ProteinID:CDY31439	ProteinID:CDY31439.1	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00047676001	PFAM:PF04535	PANTHER:PTHR11615	PANTHER:PTHR11615:SF120	TIGRFAMs:TIGR01569
TMHMM:TMhelix	UniParc:UPI0004EDD81D	SEG:seg	:	:	:

Description

BnaC03g63850DCASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1X9]

Coordinates

chrLK032272:-:188602..189633

Molecular Weight (calculated)

21097.4 Da

IEP (calculated)

10.767

GRAVY (calculated)

0.697

Length

199 amino acids

Sequence
(BLAST)

001: MPREKILFAG GGTTKSWKVL LALRILALIA TLAAAIVMGL NKETKTLVVA TIGTVPIKAT LTAKFQDTPA FVFFVIANAM VSFHNLLMIG LQIFSRKLEC
101: KGFRLLSVAI LDMLNAALVS AAANGAVFIA EIGQNGNKHA KWNKVCDRFS IYCDHGRGAL IAAFSGVILM LLVSAVSISR LSIYSNKPST STAAAVASP

Best Arabidopsis Sequence Match ( AT4G20390.1 )
(BLAST)

001: MAREKIVVAG GTTKSWKLLL GLRIFAFMAT LAAAIVMSLN KETKTLVVAT IGTVPIKATL TAKFQHTPAF VFFVIANVMV SFHNLLMIVV QIFSRKLEYK
101: GLRLLSIAIL DMLNATLVSA AANAAVFVAE LGKNGNKHAK WNKVCDRFTT YCDHGAGAII AAFAGVILML LVSAVSISRL LINSKNFSTT ATTTSVV

Arabidopsis Description

CASP-like protein 1B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP0]
SUBAcon: [extracellular,vacuole,plasma membrane,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.