Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019194.1-P | Field mustard | extracellular, plasma membrane, vacuole | 100.0 | 81.18 |
| CDX92668 | Canola | extracellular, plasma membrane, vacuole | 99.28 | 80.59 |
| CDY34336 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 86.96 | 71.01 |
| CDY03385 | Canola | plasma membrane | 86.23 | 70.41 |
| AT4G25040.1 | Thale cress | extracellular, plasma membrane, vacuole | 82.61 | 67.06 |
| CDY08965 | Canola | extracellular, plasma membrane, vacuole | 42.03 | 49.15 |
| KRH06871 | Soybean | endoplasmic reticulum, plasma membrane | 30.43 | 26.09 |
| CDY21972 | Canola | extracellular, plasma membrane | 30.43 | 25.61 |
| CDY70062 | Canola | extracellular | 21.74 | 25.0 |
| CDY48566 | Canola | extracellular, plasma membrane | 29.71 | 25.0 |
| CDX89875 | Canola | extracellular, plasma membrane, vacuole | 26.81 | 22.56 |
| CDY18177 | Canola | extracellular, plasma membrane, vacuole | 26.81 | 22.56 |
| KRG94650 | Soybean | plasma membrane | 30.43 | 21.32 |
| VIT_14s0068g01400.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid, vacuole | 31.88 | 19.13 |
| CDY49491 | Canola | plasma membrane | 26.81 | 18.59 |
| CDY49020 | Canola | plasma membrane | 26.09 | 18.09 |
| CDY14930 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.91 | 16.67 |
| CDY63706 | Canola | endoplasmic reticulum, plasma membrane, plastid | 23.91 | 16.67 |
| CDY24696 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.64 | 16.59 |
| CDX76993 | Canola | plasma membrane | 24.64 | 16.59 |
| CDY09749 | Canola | plasma membrane | 22.46 | 16.32 |
| CDY22743 | Canola | plasma membrane | 22.46 | 16.32 |
| CDY09075 | Canola | plasma membrane | 22.46 | 16.32 |
| CDY05260 | Canola | plasma membrane | 23.91 | 16.1 |
| CDX90578 | Canola | plasma membrane | 21.74 | 15.79 |
| CDX76458 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 21.74 | 15.08 |
| CDY09750 | Canola | plasma membrane | 21.01 | 15.03 |
| CDX90580 | Canola | plasma membrane | 21.01 | 15.03 |
| CDY31439 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 21.01 | 14.57 |
Protein Annotations
| EnsemblPlants:CDY11050 | EnsemblPlantsGene:GSBRNA2T00049008001 | GO:A0A078F9B3 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:CASP/CASPL | InterPro:CASP_dom | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF157 |
| PFAM:PF04535 | ProteinID:CDY11050 | ProteinID:CDY11050.1 | SEG:seg | TIGRFAMs:TIGR01569 | TMHMM:TMhelix |
| UniParc:UPI0004EE4846 | UniProt:A0A078F9B3 | MapMan:35.1 | : | : | : |
Description
BnaA03g47090DCASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9B3]
Coordinates
chrLK032008:+:814617..815673
Molecular Weight (calculated)
15249.6 Da
IEP (calculated)
8.453
GRAVY (calculated)
0.791
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLTITNHEV ASVYGINFEA KYDYSSAFRY LVYAEIAIAG MTLFTLVWAC LAVRRRGLVF ALFFFDLLTT LTAISAFSAA MSDGYIGKYG NTHAGWLPIC
101: GYVHNYCNRV TLSLALAFAS FLLLFILTVL TASAARHF
101: GYVHNYCNRV TLSLALAFAS FLLLFILTVL TASAARHF
001: MMGDNEGRRT PLLNLGVQVS MRVLTIGAAM ASMWVMITNR EVASVYGIAF EAKYSYSSAF RYLVYAQIAV CAATLFTLVW ACLAVRRRGL VFALFFFDLL
101: TTLTAISAFS AAFAEGYVGK YGNKQAGWLP ICGYVHGYCS RVTISLAMSF ASFILLFILT VLTASAARHY
101: TTLTAISAFS AAFAEGYVGK YGNKQAGWLP ICGYVHGYCS RVTISLAMSF ASFILLFILT VLTASAARHY
Arabidopsis Description
CASP-like protein 1F1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0L3]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.