Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05260 | Canola | plasma membrane | 99.02 | 99.02 |
| Bra020752.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 97.07 | 97.07 |
| CDY24696 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 97.07 | 97.07 |
| AT3G06390.1 | Thale cress | plasma membrane | 83.41 | 85.93 |
| KRH50921 | Soybean | plasma membrane | 42.93 | 45.6 |
| KRH21024 | Soybean | cytosol, plasma membrane, vacuole | 41.46 | 44.97 |
| CDY09750 | Canola | plasma membrane | 41.95 | 44.56 |
| CDX90580 | Canola | plasma membrane | 41.46 | 44.04 |
| KRH02202 | Soybean | golgi, plasma membrane, vacuole | 41.46 | 44.04 |
| PGSC0003DMT400058342 | Potato | cytosol | 40.98 | 42.64 |
| TraesCS1D01G248200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 38.05 | 41.27 |
| GSMUA_Achr5P00430_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 38.05 | 40.84 |
| VIT_05s0020g01830.t01 | Wine grape | cytosol | 40.98 | 40.38 |
| Solyc01g067300.2.1 | Tomato | cytosol | 38.54 | 40.31 |
| TraesCS1A01G248700.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 37.07 | 40.21 |
| GSMUA_Achr9P30950_001 | Banana | plasma membrane | 40.0 | 39.61 |
| Zm00001d005158_P001 | Maize | extracellular | 37.56 | 37.93 |
| Os07t0442900-01 | Rice | plasma membrane | 37.56 | 37.2 |
| Zm00001d019457_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 35.12 | 36.73 |
| TraesCS1B01G259400.1 | Wheat | plasma membrane | 33.66 | 36.51 |
| HORVU1Hr1G062380.3 | Barley | plastid | 38.05 | 35.94 |
| EER98393 | Sorghum | endoplasmic reticulum, plasma membrane, plastid, vacuole | 34.15 | 34.83 |
| CDY48566 | Canola | extracellular, plasma membrane | 22.44 | 28.05 |
| CDY49020 | Canola | plasma membrane | 26.83 | 27.64 |
| CDX89875 | Canola | extracellular, plasma membrane, vacuole | 21.95 | 27.44 |
| CDY21972 | Canola | extracellular, plasma membrane | 21.95 | 27.44 |
| CDY18177 | Canola | extracellular, plasma membrane, vacuole | 21.95 | 27.44 |
| CDY49491 | Canola | plasma membrane | 26.34 | 27.14 |
| CDX90578 | Canola | plasma membrane | 24.39 | 26.32 |
| CDY22743 | Canola | plasma membrane | 23.9 | 25.79 |
| CDY09075 | Canola | plasma membrane | 23.9 | 25.79 |
| CDY09749 | Canola | plasma membrane | 23.9 | 25.79 |
| CDY14930 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.39 | 25.25 |
| CDY63706 | Canola | endoplasmic reticulum, plasma membrane, plastid | 24.39 | 25.25 |
| CDY34336 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 20.49 | 24.85 |
| CDY03385 | Canola | plasma membrane | 20.49 | 24.85 |
| CDY11050 | Canola | cytosol | 16.59 | 24.64 |
| CDY70062 | Canola | extracellular | 14.15 | 24.17 |
| CDY31439 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 23.41 | 24.12 |
| CDX76458 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 23.41 | 24.12 |
| CDX92668 | Canola | extracellular, plasma membrane, vacuole | 19.02 | 22.94 |
| CDY08965 | Canola | extracellular, plasma membrane, vacuole | 12.2 | 21.19 |
Protein Annotations
| MapMan:35.1 | GO:A0A078CPJ6 | InterPro:CASP/CASPL | InterPro:CASP_dom | EnsemblPlants:CDX76993 | ProteinID:CDX76993 |
| ProteinID:CDX76993.1 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00127548001 | PFAM:PF04535 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF150 | TIGRFAMs:TIGR01569 | TMHMM:TMhelix |
| UniParc:UPI0004EEED79 | SEG:seg | : | : | : | : |
Description
BnaC04g37880D
Coordinates
chrLK031809:+:183236..184255
Molecular Weight (calculated)
21882.7 Da
IEP (calculated)
4.378
GRAVY (calculated)
0.631
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTENPDPE TGKSEPLPAS TEPLTPPQAP SSASGFLDCR KIDIIIRVLL FSATLTALIV MVTSDQTEMT QLPGAPSPAP VSAEFSDSPA FIYFVVALVV
101: AGFYALISTI ISISLLLRPE FVAQFSIYIS SFDMVVLGIL ASATGTAGGV AYIALKGNEE IGWNKICNVY DKFCRYIATS LALSLFASLL LLVLSIFSLW
201: KRTAT
101: AGFYALISTI ISISLLLRPE FVAQFSIYIS SFDMVVLGIL ASATGTAGGV AYIALKGNEE IGWNKICNVY DKFCRYIATS LALSLFASLL LLVLSIFSLW
201: KRTAT
001: MASTENPDPE TGKSEPIPAS ATPPPSSAAS FLDCRKIDII TRVLLFSATL TALIVMVTSD QTEMTQLPGV SSPAPVSAEF NDSPAFIYFV VALVVASFYA
101: LISTLVSISL LLKPEFTAQF SIYLASLDMV MLGILASATG TAGGVAYIAL KGNEEVGWNK ICNVYDKFCR YIATSLALSL FASLLLLVLS IWSALSKRT
101: LISTLVSISL LLKPEFTAQF SIYLASLDMV MLGILASATG TAGGVAYIAL KGNEEVGWNK ICNVYDKFCR YIATSLALSL FASLLLLVLS IWSALSKRT
Arabidopsis Description
CASP-like protein 1D2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQU2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.