Factsheet for HORVU1Hr1G062380.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
TargetP:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G248700.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	81.57	93.65
TraesCS1D01G248200.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	80.65	92.59
TraesCS1B01G259400.1	Wheat	plasma membrane	72.81	83.6
Os07t0442900-01	Rice	plasma membrane	61.29	64.25
Zm00001d005158_P001	Maize	extracellular	58.53	62.56
Zm00001d019457_P001	Maize	endoplasmic reticulum, plasma membrane, plastid, vacuole	56.22	62.24
EER98393	Sorghum	endoplasmic reticulum, plasma membrane, plastid, vacuole	54.38	58.71
GSMUA_Achr5P00430_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	47.0	53.4
GSMUA_Achr9P30950_001	Banana	plasma membrane	46.54	48.79
KRH50921	Soybean	plasma membrane	40.09	45.08
KRH02202	Soybean	golgi, plasma membrane, vacuole	39.63	44.56
KRH21024	Soybean	cytosol, plasma membrane, vacuole	35.94	41.27
AT3G06390.1	Thale cress	plasma membrane	37.33	40.7
PGSC0003DMT400058342	Potato	cytosol	36.87	40.61
Solyc01g067300.2.1	Tomato	cytosol	36.41	40.31
AT4G15610.1	Thale cress	plasma membrane	34.56	38.86
CDY09750	Canola	plasma membrane	34.56	38.86
CDX90580	Canola	plasma membrane	34.56	38.86
Bra012777.1-P	Field mustard	plasma membrane	34.56	38.86
VIT_05s0020g01830.t01	Wine grape	cytosol	36.87	38.46
CDY05260	Canola	plasma membrane	35.94	38.05
CDX76993	Canola	plasma membrane	35.94	38.05
CDY24696	Canola	endoplasmic reticulum, plasma membrane, vacuole	35.48	37.56
Bra020752.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	35.48	37.56
HORVU3Hr1G032350.1	Barley	plasma membrane	19.35	26.92
HORVU7Hr1G091440.2	Barley	plastid	23.04	25.0
HORVU7Hr1G027410.1	Barley	extracellular, plasma membrane	17.97	24.07

Protein Annotations

EnsemblPlants:HORVU1Hr1G062380.3	EnsemblPlantsGene:HORVU1Hr1G062380	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020
GO:GO:0016021	InterPro:CASP/CASPL	InterPro:CASP_dom	PANTHER:PTHR11615	PANTHER:PTHR11615:SF150	PFAM:PF04535
SEG:seg	TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI000B471997	UniProt:A0A287FWT9	MapMan:35.1

Description

CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A287FWT9]

Coordinates

chrchr1H:+:449380119..449381389

Molecular Weight (calculated)

23066.6 Da

IEP (calculated)

10.418

GRAVY (calculated)

0.501

Length

217 amino acids

Sequence
(BLAST)

001: IHQLRAKTQK PHTPPAMAYR QARAPTEGMA STVEDSGNTA PSSSVKLRGA DLALRVLLFA VSLSGLVVLV TAKQTEIVPL VLTPPFRFGP VPAQFKDSPA
101: LIYLLVALCM TSLYSLLTAA SSIKSMSSSA SCAKGLFILI LFDVVYAGIM ASATGTAGAV AWVGLKGNSH TRWNKICNIY DKFCRHIGSA TCLGLIASII
201: LVLLVVLNAY SLSRRSR

Best Arabidopsis Sequence Match ( AT3G06390.1 )
(BLAST)

001: MASTENPDPE TGKSEPIPAS ATPPPSSAAS FLDCRKIDII TRVLLFSATL TALIVMVTSD QTEMTQLPGV SSPAPVSAEF NDSPAFIYFV VALVVASFYA
101: LISTLVSISL LLKPEFTAQF SIYLASLDMV MLGILASATG TAGGVAYIAL KGNEEVGWNK ICNVYDKFCR YIATSLALSL FASLLLLVLS IWSALSKRT

Arabidopsis Description

CASP-like protein 1D2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQU2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.