Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G248200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 87.3 | 87.3 |
| TraesCS1A01G248700.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 86.24 | 86.24 |
| HORVU1Hr1G062380.3 | Barley | plastid | 83.6 | 72.81 |
| Os07t0442900-01 | Rice | plasma membrane | 65.61 | 59.9 |
| Zm00001d019457_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 61.9 | 59.69 |
| Zm00001d005158_P001 | Maize | extracellular | 62.43 | 58.13 |
| EER98393 | Sorghum | endoplasmic reticulum, plasma membrane, plastid, vacuole | 61.38 | 57.71 |
| GSMUA_Achr5P00430_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 50.79 | 50.26 |
| GSMUA_Achr9P30950_001 | Banana | plasma membrane | 50.79 | 46.38 |
| KRH50921 | Soybean | plasma membrane | 42.86 | 41.97 |
| KRH02202 | Soybean | golgi, plasma membrane, vacuole | 42.33 | 41.45 |
| PGSC0003DMT400058342 | Potato | cytosol | 39.68 | 38.07 |
| Solyc01g067300.2.1 | Tomato | cytosol | 39.15 | 37.76 |
| VIT_05s0020g01830.t01 | Wine grape | cytosol | 41.27 | 37.5 |
| AT4G15610.1 | Thale cress | plasma membrane | 38.1 | 37.31 |
| CDY09750 | Canola | plasma membrane | 38.1 | 37.31 |
| CDX90580 | Canola | plasma membrane | 38.1 | 37.31 |
| Bra012777.1-P | Field mustard | plasma membrane | 38.1 | 37.31 |
| AT3G06390.1 | Thale cress | plasma membrane | 39.15 | 37.19 |
| KRH21024 | Soybean | cytosol, plasma membrane, vacuole | 37.04 | 37.04 |
| CDY05260 | Canola | plasma membrane | 36.51 | 33.66 |
| CDX76993 | Canola | plasma membrane | 36.51 | 33.66 |
| CDY24696 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 35.98 | 33.17 |
| Bra020752.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 35.98 | 33.17 |
| TraesCS3B01G190800.1 | Wheat | mitochondrion | 20.63 | 25.0 |
| TraesCS7B01G031400.1 | Wheat | plasma membrane | 19.05 | 22.22 |
| TraesCS7B01G287500.1 | Wheat | plastid | 22.75 | 21.72 |
| TraesCS5B01G054100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 20.63 | 19.9 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G259400.1 | EnsemblPlantsGene:TraesCS1B01G259400 | InterPro:CASP/CASPL | InterPro:CASP_dom | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF150 |
| PFAM:PF04535 | SEG:seg | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1B:-:456839537..456840289
Molecular Weight (calculated)
20016.9 Da
IEP (calculated)
9.854
GRAVY (calculated)
0.741
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGTVEDSGK TAPSSPAWLH GADLGLRVLL FAVSLSGLVV LVTAKQTEIV PLQRLASAHV RESIVVTYVS PLLRYLLVAL CMTSLYSLLT AASSVKSMSS
101: SASCAKGIFV LILLDVVYAG IMASATGTAG AVAWVGLKGN SHTRWNKICN IYDKFCRHIG SATCLGLVAS IILVLLVVLN AYSLYRRSR
101: SASCAKGIFV LILLDVVYAG IMASATGTAG AVAWVGLKGN SHTRWNKICN IYDKFCRHIG SATCLGLVAS IILVLLVVLN AYSLYRRSR
001: MGYETKSTLD TERSTAPGTG TTTKSCSMTQ VVLRFVLFAA TLTSIVVMVT SKQTKNIFLP GTPIRIPAAE FTNSPALIYF VVALSVACFY SIVSTFVTVS
101: AFKKHSCSAV LLLNLAIMDA VMVGIVASAT GAGGGVAYLG LKGNKEVRWG KICHIYDKFC RHVGGAIAVS LFASVVLLLL SIISVLSLYK KIR
101: AFKKHSCSAV LLLNLAIMDA VMVGIVASAT GAGGGVAYLG LKGNKEVRWG KICHIYDKFC RHVGGAIAVS LFASVVLLLL SIISVLSLYK KIR
Arabidopsis Description
CASP-like protein 1D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE29]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.