Factsheet for TraesCS3B01G190800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G167400.1	Wheat	plasma membrane	96.79	96.79
TraesCS3A01G160200.1	Wheat	plasma membrane	96.79	96.79
HORVU3Hr1G032350.1	Barley	plasma membrane	96.15	96.15
GSMUA_Achr6P13870_001	Banana	extracellular, plasma membrane	58.33	56.88
Os01t0237000-01	Rice	golgi, plasma membrane, vacuole	55.77	53.7
TraesCS7B01G031400.1	Wheat	plasma membrane	50.0	48.15
VIT_12s0028g03760.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	46.79	45.34
KRH50041	Soybean	plasma membrane	44.87	43.75
Bra034215.1-P	Field mustard	extracellular, plasma membrane	44.87	42.68
CDY21972	Canola	extracellular, plasma membrane	44.87	42.68
CDY48566	Canola	extracellular, plasma membrane	44.87	42.68
GSMUA_Achr3P03240_001	Banana	plasma membrane	53.21	42.35
KRH25574	Soybean	endoplasmic reticulum, plasma membrane, vacuole	42.95	41.1
KRH55963	Soybean	extracellular	42.31	40.49
AT4G03540.1	Thale cress	extracellular, plasma membrane, vacuole	42.31	40.24
PGSC0003DMT400076357	Potato	extracellular	40.38	38.89
AT1G03700.1	Thale cress	plasma membrane	40.38	38.41
Solyc02g078250.2.1	Tomato	extracellular	39.74	38.27
CDY18177	Canola	extracellular, plasma membrane, vacuole	39.74	37.8
CDX89875	Canola	extracellular, plasma membrane, vacuole	39.74	37.8
KRH72716	Soybean	extracellular	33.97	37.59
CDY70062	Canola	extracellular	28.85	37.5
Bra015256.1-P	Field mustard	extracellular, plasma membrane, vacuole	40.38	36.0
KRH17069	Soybean	extracellular, plasma membrane, vacuole	38.46	35.93
TraesCS5B01G054100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	35.26	28.06
TraesCS7B01G287500.1	Wheat	plastid	33.33	26.26
TraesCS1B01G259400.1	Wheat	plasma membrane	25.0	20.63

Protein Annotations

EnsemblPlants:TraesCS3B01G190800.1	EnsemblPlantsGene:TraesCS3B01G190800	InterPro:CASP/CASPL	InterPro:CASP_dom	PANTHER:PTHR11615	PANTHER:PTHR11615:SF218
PFAM:PF04535	SEG:seg	TIGRFAMs:TIGR01569	TMHMM:TMhelix	MapMan:35.2	:

Description

No Description!

Coordinates

chr3B:+:203642974..203643636

Molecular Weight (calculated)

15800.6 Da

IEP (calculated)

9.758

GRAVY (calculated)

0.983

Length

156 amino acids

Sequence
(BLAST)

001: MAKARRSVVL ALRIGTAAAA GVAAIVMATS HKTTTVFGVQ VQAKFQYTPS FVFFVAANVV ACAYSLLALL VPPASPAARH VLVADAALGM VLTGAAAAAA
101: AISALGKNGN SHAGWQPICG LVPTFCDHVT GALACGFVAV VLHLLVVLHS IYTMNS

Best Arabidopsis Sequence Match ( AT1G03700.1 )
(BLAST)

001: MVKLTQRLGG LVLRFAAFCA ALGAVIAMIT SRERSSFFVI SLVAKYSDLA AFKYFVIANA IVTVYSFLVL FLPKESLLWK FVVVLDLMVT MLLTSSLSAA
101: VAVAQVGKRG NANAGWLPIC GQVPRFCDQI TGALIAGLVA LVLYVFLLIF SIHHVVDPFL LRKS

Arabidopsis Description

CASP-like protein 1C2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR57]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.