Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034215.1-P | Field mustard | extracellular, plasma membrane | 95.12 | 95.12 |
| CDY48566 | Canola | extracellular, plasma membrane | 95.12 | 95.12 |
| CDY21972 | Canola | extracellular, plasma membrane | 94.51 | 94.51 |
| AT1G03700.1 | Thale cress | plasma membrane | 83.54 | 83.54 |
| KRH25574 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 63.41 | 63.8 |
| KRH55963 | Soybean | extracellular | 60.37 | 60.74 |
| VIT_12s0028g03760.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 57.93 | 59.01 |
| KRH17069 | Soybean | extracellular, plasma membrane, vacuole | 51.83 | 50.9 |
| EES19280 | Sorghum | extracellular, plasma membrane, vacuole | 48.17 | 48.77 |
| TraesCS7D01G130400.1 | Wheat | plasma membrane | 47.56 | 48.15 |
| TraesCS7B01G031400.1 | Wheat | plasma membrane | 46.95 | 47.53 |
| TraesCS7A01G131000.1 | Wheat | plasma membrane | 46.95 | 47.53 |
| GSMUA_Achr6P13870_001 | Banana | extracellular, plasma membrane | 46.34 | 47.5 |
| Zm00001d010038_P001 | Maize | plasma membrane | 46.34 | 46.63 |
| HORVU7Hr1G027410.1 | Barley | extracellular, plasma membrane | 45.73 | 46.3 |
| KRH72716 | Soybean | extracellular | 39.63 | 46.1 |
| Os05t0245300-01 | Rice | mitochondrion, plasma membrane | 43.9 | 44.44 |
| TraesCS3A01G160200.1 | Wheat | plasma membrane | 40.85 | 42.95 |
| TraesCS3D01G167400.1 | Wheat | plasma membrane | 40.85 | 42.95 |
| TraesCS3B01G190800.1 | Wheat | mitochondrion | 40.24 | 42.31 |
| HORVU3Hr1G032350.1 | Barley | plasma membrane | 39.63 | 41.67 |
| Os01t0237000-01 | Rice | golgi, plasma membrane, vacuole | 37.8 | 38.27 |
| GSMUA_Achr3P03240_001 | Banana | plasma membrane | 43.9 | 36.73 |
| AT4G25040.1 | Thale cress | extracellular, plasma membrane, vacuole | 34.15 | 32.94 |
| AT5G44550.1 | Thale cress | plasma membrane | 34.76 | 28.93 |
| AT4G20390.1 | Thale cress | extracellular, mitochondrion, plasma membrane, vacuole | 34.76 | 28.93 |
| AT4G15610.1 | Thale cress | plasma membrane | 30.49 | 25.91 |
| AT4G15630.1 | Thale cress | plasma membrane | 28.05 | 24.21 |
| AT3G06390.1 | Thale cress | plasma membrane | 29.27 | 24.12 |
| AT4G15620.1 | Thale cress | plasma membrane | 27.44 | 23.68 |
Protein Annotations
| MapMan:35.1 | EntrezGene:825651 | UniProt:A0A178V2N5 | ProteinID:AAD11596.1 | ProteinID:AAD15310.1 | ProteinID:AEE82335.1 |
| ArrayExpress:AT4G03540 | EnsemblPlantsGene:AT4G03540 | RefSeq:AT4G03540 | TAIR:AT4G03540 | RefSeq:AT4G03540-TAIR-G | EnsemblPlants:AT4G03540.1 |
| TAIR:AT4G03540.1 | ProteinID:CAB77839.1 | InterPro:CASP/CASPL | InterPro:CASP_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0051536 |
| RefSeq:NP_192263.1 | ProteinID:OAO99312.1 | PFAM:PF04535 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF159 | UniProt:Q9ZT81 |
| TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI00000A25DE | SEG:seg | : | : |
Description
CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178V2N5]
Coordinates
chr4:+:1569937..1571737
Molecular Weight (calculated)
17671.5 Da
IEP (calculated)
10.084
GRAVY (calculated)
1.082
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKLTKRIGG LVLRLAAFGA ALAALIVMIT SRERASFLAI SLEAKYTDMA AFKYFVIANA VVSVYSFLVL FLPKESLLWK FVVVLDLVMT MLLTSSLSAA
101: LAVAQVGKKG NANAGWLPIC GQVPKFCDQI TGALIAGFVA LVLYVLLLLY SLHAVVDPFL LQKS
101: LAVAQVGKKG NANAGWLPIC GQVPKFCDQI TGALIAGFVA LVLYVLLLLY SLHAVVDPFL LQKS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.