Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G031400.1 | Wheat | plasma membrane | 97.53 | 97.53 |
| TraesCS7A01G131000.1 | Wheat | plasma membrane | 96.3 | 96.3 |
| HORVU7Hr1G027410.1 | Barley | extracellular, plasma membrane | 96.3 | 96.3 |
| EES19280 | Sorghum | extracellular, plasma membrane, vacuole | 71.6 | 71.6 |
| Zm00001d010038_P001 | Maize | plasma membrane | 70.99 | 70.55 |
| Os05t0245300-01 | Rice | mitochondrion, plasma membrane | 67.9 | 67.9 |
| GSMUA_Achr6P13870_001 | Banana | extracellular, plasma membrane | 51.23 | 51.88 |
| Bra034215.1-P | Field mustard | extracellular, plasma membrane | 50.0 | 49.39 |
| CDY48566 | Canola | extracellular, plasma membrane | 50.0 | 49.39 |
| TraesCS3D01G167400.1 | Wheat | plasma membrane | 47.53 | 49.36 |
| CDY21972 | Canola | extracellular, plasma membrane | 49.38 | 48.78 |
| AT4G03540.1 | Thale cress | extracellular, plasma membrane, vacuole | 48.15 | 47.56 |
| KRH50041 | Soybean | plasma membrane | 45.68 | 46.25 |
| VIT_12s0028g03760.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 45.68 | 45.96 |
| CDX89875 | Canola | extracellular, plasma membrane, vacuole | 44.44 | 43.9 |
| CDY18177 | Canola | extracellular, plasma membrane, vacuole | 44.44 | 43.9 |
| AT1G03700.1 | Thale cress | plasma membrane | 43.83 | 43.29 |
| KRH25574 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 42.59 | 42.33 |
| Solyc02g078250.2.1 | Tomato | extracellular | 41.98 | 41.98 |
| PGSC0003DMT400076357 | Potato | extracellular | 41.36 | 41.36 |
| Bra015256.1-P | Field mustard | extracellular, plasma membrane, vacuole | 44.44 | 41.14 |
| CDY70062 | Canola | extracellular | 30.25 | 40.83 |
| GSMUA_Achr3P03240_001 | Banana | plasma membrane | 48.77 | 40.31 |
| KRH55963 | Soybean | extracellular | 40.12 | 39.88 |
| KRH72716 | Soybean | extracellular | 31.48 | 36.17 |
| KRH17069 | Soybean | extracellular, plasma membrane, vacuole | 35.19 | 34.13 |
| TraesCS5D01G059600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 29.63 | 24.49 |
| TraesCS7D01G381200.1 | Wheat | plastid | 27.78 | 22.39 |
| TraesCS1D01G248200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 23.46 | 20.11 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G130400.1 | EnsemblPlantsGene:TraesCS7D01G130400 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009733 |
| GO:GO:0009741 | GO:GO:0009826 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0035264 |
| GO:GO:0040007 | InterPro:CASP/CASPL | InterPro:CASP_dom | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF218 | PFAM:PF04535 |
| SEG:seg | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7D:+:82714482..82715049
Molecular Weight (calculated)
17090.4 Da
IEP (calculated)
7.162
GRAVY (calculated)
1.063
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKLHRLISV VLRLVAAVTA AAAAIIMVTS RETTSLFGLE IEAKFSHIPS FIFFVVAYAV ACVYSLLVAF VPPGGAASRL LVMTDVVMGM VLTGAVAATG
101: AIAEVGRNGN EHAGWLPICE QVHGYCNQVM GALIAGFVAL VVYFLIIMHS LHAVTDTMCP CH
101: AIAEVGRNGN EHAGWLPICE QVHGYCNQVM GALIAGFVAL VVYFLIIMHS LHAVTDTMCP CH
001: MVKLTKRIGG LVLRLAAFGA ALAALIVMIT SRERASFLAI SLEAKYTDMA AFKYFVIANA VVSVYSFLVL FLPKESLLWK FVVVLDLVMT MLLTSSLSAA
101: LAVAQVGKKG NANAGWLPIC GQVPKFCDQI TGALIAGFVA LVLYVLLLLY SLHAVVDPFL LQKS
101: LAVAQVGKKG NANAGWLPIC GQVPKFCDQI TGALIAGFVA LVLYVLLLLY SLHAVVDPFL LQKS
Arabidopsis Description
CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178V2N5]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.