Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 6
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH55963 | Soybean | extracellular | 91.41 | 91.41 |
| Bra034215.1-P | Field mustard | extracellular, plasma membrane | 65.64 | 65.24 |
| CDY48566 | Canola | extracellular, plasma membrane | 65.64 | 65.24 |
| CDY21972 | Canola | extracellular, plasma membrane | 65.03 | 64.63 |
| AT4G03540.1 | Thale cress | extracellular, plasma membrane, vacuole | 63.8 | 63.41 |
| KRH17069 | Soybean | extracellular, plasma membrane, vacuole | 63.19 | 61.68 |
| CDX89875 | Canola | extracellular, plasma membrane, vacuole | 60.74 | 60.37 |
| CDY18177 | Canola | extracellular, plasma membrane, vacuole | 60.74 | 60.37 |
| AT1G03700.1 | Thale cress | plasma membrane | 60.74 | 60.37 |
| CDY70062 | Canola | extracellular | 44.17 | 60.0 |
| VIT_12s0028g03760.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 57.06 | 57.76 |
| Bra015256.1-P | Field mustard | extracellular, plasma membrane, vacuole | 60.74 | 56.57 |
| KRH72716 | Soybean | extracellular | 48.47 | 56.03 |
| KRH50041 | Soybean | plasma membrane | 53.99 | 55.0 |
| GSMUA_Achr6P13870_001 | Banana | extracellular, plasma membrane | 47.85 | 48.75 |
| TraesCS3D01G167400.1 | Wheat | plasma membrane | 41.1 | 42.95 |
| TraesCS3B01G190800.1 | Wheat | mitochondrion | 41.1 | 42.95 |
| TraesCS3A01G160200.1 | Wheat | plasma membrane | 41.1 | 42.95 |
| HORVU7Hr1G027410.1 | Barley | extracellular, plasma membrane | 42.33 | 42.59 |
| TraesCS7D01G130400.1 | Wheat | plasma membrane | 42.33 | 42.59 |
| HORVU3Hr1G032350.1 | Barley | plasma membrane | 40.49 | 42.31 |
| TraesCS7B01G031400.1 | Wheat | plasma membrane | 41.72 | 41.98 |
| TraesCS7A01G131000.1 | Wheat | plasma membrane | 41.72 | 41.98 |
| EES19280 | Sorghum | extracellular, plasma membrane, vacuole | 41.1 | 41.36 |
| Zm00001d010038_P001 | Maize | plasma membrane | 39.88 | 39.88 |
| Os05t0245300-01 | Rice | mitochondrion, plasma membrane | 38.65 | 38.89 |
| GSMUA_Achr3P03240_001 | Banana | plasma membrane | 43.56 | 36.22 |
| Os01t0237000-01 | Rice | golgi, plasma membrane, vacuole | 31.9 | 32.1 |
| KRH06871 | Soybean | endoplasmic reticulum, plasma membrane | 28.22 | 28.57 |
| KRH37705 | Soybean | extracellular, plasma membrane, plastid, vacuole | 31.29 | 26.98 |
| KRH50920 | Soybean | cytosol, plasma membrane, vacuole | 30.67 | 26.6 |
| KRH02204 | Soybean | cytosol, plasma membrane, vacuole | 30.06 | 26.2 |
| KRG94650 | Soybean | plasma membrane | 31.29 | 25.89 |
| KRH43078 | Soybean | peroxisome, plasma membrane, plastid, vacuole | 30.67 | 25.77 |
| KRH11251 | Soybean | plasma membrane | 31.29 | 25.25 |
| KRH68112 | Soybean | plasma membrane | 29.45 | 24.87 |
| KRH12746 | Soybean | cytosol, plasma membrane, vacuole | 30.06 | 24.38 |
| KRG96380 | Soybean | plasma membrane | 28.22 | 23.47 |
| KRH50921 | Soybean | plasma membrane | 27.61 | 23.32 |
| KRH02202 | Soybean | golgi, plasma membrane, vacuole | 27.61 | 23.32 |
| KRH21024 | Soybean | cytosol, plasma membrane, vacuole | 26.99 | 23.28 |
| KRH59207 | Soybean | extracellular, plasma membrane, vacuole | 31.29 | 21.89 |
Protein Annotations
| EntrezGene:100809698 | MapMan:35.1 | EMBL:ACUP02007287 | InterPro:CASP/CASPL | InterPro:CASP_dom | EnsemblPlantsGene:GLYMA_12G113100 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0051536 | UniProt:I1LS23 | EnsemblPlants:KRH25574 | ProteinID:KRH25574 | ProteinID:KRH25574.1 |
| PFAM:PF04535 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF159 | SignalP:SignalP-TM | TIGRFAMs:TIGR01569 | TMHMM:TMhelix |
| UniParc:UPI000233C732 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:11078364..11079923
Molecular Weight (calculated)
17937.6 Da
IEP (calculated)
9.689
GRAVY (calculated)
0.937
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTRRVCHL LLRFLAFAAT LAAVIMMATS HETATIFTVS FEAKYTNSPA FKYFVIAYSV ITVYGFLVLF LPAKSLLWQL VVALDLVFTM LVVSSFSASL
101: AIAQVGKKGN SDAGWLPICD SVPKYCDQAT RALIAGFIAM IIYIILLLHS IHTVIDPLLL RKS
101: AIAQVGKKGN SDAGWLPICD SVPKYCDQAT RALIAGFIAM IIYIILLLHS IHTVIDPLLL RKS
001: MVKLTQRLGG LVLRFAAFCA ALGAVIAMIT SRERSSFFVI SLVAKYSDLA AFKYFVIANA IVTVYSFLVL FLPKESLLWK FVVVLDLMVT MLLTSSLSAA
101: VAVAQVGKRG NANAGWLPIC GQVPRFCDQI TGALIAGLVA LVLYVFLLIF SIHHVVDPFL LRKS
101: VAVAQVGKRG NANAGWLPIC GQVPRFCDQI TGALIAGLVA LVLYVFLLIF SIHHVVDPFL LRKS
Arabidopsis Description
CASP-like protein 1C2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR57]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.