Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 4
- plasma membrane 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89875 | Canola | extracellular, plasma membrane, vacuole | 96.34 | 96.34 |
| CDY18177 | Canola | extracellular, plasma membrane, vacuole | 96.34 | 96.34 |
| CDY70062 | Canola | extracellular | 66.46 | 90.83 |
| Bra015256.1-P | Field mustard | extracellular, plasma membrane, vacuole | 95.73 | 89.71 |
| AT4G03540.1 | Thale cress | extracellular, plasma membrane, vacuole | 83.54 | 83.54 |
| KRH25574 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 60.37 | 60.74 |
| KRH55963 | Soybean | extracellular | 57.93 | 58.28 |
| VIT_12s0028g03760.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 52.44 | 53.42 |
| KRH17069 | Soybean | extracellular, plasma membrane, vacuole | 49.39 | 48.5 |
| KRH72716 | Soybean | extracellular | 39.63 | 46.1 |
| EES19280 | Sorghum | extracellular, plasma membrane, vacuole | 45.12 | 45.68 |
| GSMUA_Achr6P13870_001 | Banana | extracellular, plasma membrane | 44.51 | 45.62 |
| TraesCS7D01G130400.1 | Wheat | plasma membrane | 43.29 | 43.83 |
| TraesCS7A01G131000.1 | Wheat | plasma membrane | 43.29 | 43.83 |
| TraesCS7B01G031400.1 | Wheat | plasma membrane | 42.68 | 43.21 |
| Zm00001d010038_P001 | Maize | plasma membrane | 42.68 | 42.94 |
| HORVU7Hr1G027410.1 | Barley | extracellular, plasma membrane | 41.46 | 41.98 |
| Os05t0245300-01 | Rice | mitochondrion, plasma membrane | 40.85 | 41.36 |
| TraesCS3A01G160200.1 | Wheat | plasma membrane | 38.41 | 40.38 |
| TraesCS3B01G190800.1 | Wheat | mitochondrion | 38.41 | 40.38 |
| TraesCS3D01G167400.1 | Wheat | plasma membrane | 38.41 | 40.38 |
| GSMUA_Achr3P03240_001 | Banana | plasma membrane | 46.95 | 39.29 |
| HORVU3Hr1G032350.1 | Barley | plasma membrane | 37.2 | 39.1 |
| Os01t0237000-01 | Rice | golgi, plasma membrane, vacuole | 34.76 | 35.19 |
| AT4G25040.1 | Thale cress | extracellular, plasma membrane, vacuole | 30.49 | 29.41 |
| AT4G20390.1 | Thale cress | extracellular, mitochondrion, plasma membrane, vacuole | 32.93 | 27.41 |
| AT5G44550.1 | Thale cress | plasma membrane | 32.32 | 26.9 |
| AT4G15630.1 | Thale cress | plasma membrane | 28.66 | 24.74 |
| AT4G15610.1 | Thale cress | plasma membrane | 28.05 | 23.83 |
| AT4G15620.1 | Thale cress | plasma membrane | 27.44 | 23.68 |
| AT3G06390.1 | Thale cress | plasma membrane | 25.61 | 21.11 |
Protein Annotations
| MapMan:35.1 | EntrezGene:825651 | EntrezGene:839428 | UniProt:A0A178WAG7 | ProteinID:AAD11596.1 | ProteinID:AAD15310.1 |
| ProteinID:AAF86520.1 | ProteinID:AEE27599.1 | ProteinID:AEE82335.1 | ArrayExpress:AT1G03700 | EnsemblPlantsGene:AT1G03700 | RefSeq:AT1G03700 |
| TAIR:AT1G03700 | RefSeq:AT1G03700-TAIR-G | EnsemblPlants:AT1G03700.1 | TAIR:AT1G03700.1 | ProteinID:CAB77839.1 | InterPro:CASP/CASPL |
| InterPro:CASP_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0051536 | RefSeq:NP_192263.1 | RefSeq:NP_563689.1 | ProteinID:OAO99312.1 |
| ProteinID:OAP15417.1 | PFAM:PF04535 | PO:PO:0007611 | PO:PO:0009046 | PO:PO:0020100 | PANTHER:PTHR11615 |
| PANTHER:PTHR11615:SF159 | UniProt:Q9LR57 | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI00000A0A3E | SEG:seg |
Description
CASP-like protein 1C2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR57]
Coordinates
chr1:+:920950..922098
Molecular Weight (calculated)
17859.6 Da
IEP (calculated)
10.279
GRAVY (calculated)
1.111
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKLTQRLGG LVLRFAAFCA ALGAVIAMIT SRERSSFFVI SLVAKYSDLA AFKYFVIANA IVTVYSFLVL FLPKESLLWK FVVVLDLMVT MLLTSSLSAA
101: VAVAQVGKRG NANAGWLPIC GQVPRFCDQI TGALIAGLVA LVLYVFLLIF SIHHVVDPFL LRKS
101: VAVAQVGKRG NANAGWLPIC GQVPRFCDQI TGALIAGLVA LVLYVFLLIF SIHHVVDPFL LRKS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.