Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034215.1-P | Field mustard | extracellular, plasma membrane | 60.25 | 59.15 |
| CDY48566 | Canola | extracellular, plasma membrane | 60.25 | 59.15 |
| CDY21972 | Canola | extracellular, plasma membrane | 59.63 | 58.54 |
| AT4G03540.1 | Thale cress | extracellular, plasma membrane, vacuole | 59.01 | 57.93 |
| KRH25574 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 57.76 | 57.06 |
| KRH55963 | Soybean | extracellular | 54.04 | 53.37 |
| CDX89875 | Canola | extracellular, plasma membrane, vacuole | 54.04 | 53.05 |
| CDY18177 | Canola | extracellular, plasma membrane, vacuole | 54.04 | 53.05 |
| GSMUA_Achr6P13870_001 | Banana | extracellular, plasma membrane | 52.17 | 52.5 |
| AT1G03700.1 | Thale cress | plasma membrane | 53.42 | 52.44 |
| CDY70062 | Canola | extracellular | 37.89 | 50.83 |
| Bra015256.1-P | Field mustard | extracellular, plasma membrane, vacuole | 54.04 | 49.71 |
| KRH17069 | Soybean | extracellular, plasma membrane, vacuole | 49.69 | 47.9 |
| EES19280 | Sorghum | extracellular, plasma membrane, vacuole | 47.2 | 46.91 |
| KRH72716 | Soybean | extracellular | 40.99 | 46.81 |
| TraesCS3D01G167400.1 | Wheat | plasma membrane | 45.34 | 46.79 |
| TraesCS3B01G190800.1 | Wheat | mitochondrion | 45.34 | 46.79 |
| TraesCS3A01G160200.1 | Wheat | plasma membrane | 45.34 | 46.79 |
| HORVU3Hr1G032350.1 | Barley | plasma membrane | 44.72 | 46.15 |
| Zm00001d010038_P001 | Maize | plasma membrane | 46.58 | 46.01 |
| TraesCS7D01G130400.1 | Wheat | plasma membrane | 45.96 | 45.68 |
| HORVU7Hr1G027410.1 | Barley | extracellular, plasma membrane | 45.34 | 45.06 |
| TraesCS7A01G131000.1 | Wheat | plasma membrane | 45.34 | 45.06 |
| TraesCS7B01G031400.1 | Wheat | plasma membrane | 45.34 | 45.06 |
| Os05t0245300-01 | Rice | mitochondrion, plasma membrane | 44.1 | 43.83 |
| Os01t0237000-01 | Rice | golgi, plasma membrane, vacuole | 40.99 | 40.74 |
| GSMUA_Achr3P03240_001 | Banana | plasma membrane | 49.07 | 40.31 |
| VIT_10s0092g00220.t01 | Wine grape | cytosol, plasma membrane, vacuole | 36.65 | 28.92 |
| VIT_17s0000g00560.t01 | Wine grape | endoplasmic reticulum | 34.16 | 26.7 |
| VIT_05s0020g01820.t01 | Wine grape | cytosol, plasma membrane, vacuole | 29.81 | 24.62 |
| VIT_07s0104g01350.t01 | Wine grape | cytosol | 29.81 | 23.76 |
| VIT_05s0020g01830.t01 | Wine grape | cytosol | 28.57 | 22.12 |
| VIT_14s0068g01400.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid, vacuole | 25.47 | 17.83 |
Protein Annotations
| EntrezGene:100242039 | wikigene:100242039 | MapMan:35.1 | UniProt:A7PJ32 | InterPro:CASP/CASPL | InterPro:CASP_dom |
| EMBL:CB346086 | ProteinID:CBI21849 | ProteinID:CBI21849.3 | EMBL:FN595235 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0051536 |
| EntrezGene:LOC100242039 | wikigene:LOC100242039 | PFAM:PF04535 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF218 | TIGR:TC58701 |
| TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI00015C9F53 | ArrayExpress:VIT_12s0028g03760 | EnsemblPlantsGene:VIT_12s0028g03760 | EnsemblPlants:VIT_12s0028g03760.t01 |
| unigene:Vvi.4641 | RefSeq:XP_002272783 | RefSeq:XP_002272783.1 | SEG:seg | : | : |
Description
CASP-like protein 1C2 [Source:UniProtKB/Swiss-Prot;Acc:A7PJ32]
Coordinates
chr12:-:4637715..4638689
Molecular Weight (calculated)
17377.4 Da
IEP (calculated)
8.921
GRAVY (calculated)
0.707
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKNTDRICF LVLRLLAFGA TLSAAIVMAT SHERTTYLSL SIEAKYSHTP AFKYFVIANA IGSAYSLLLL FLPSHGSLWP LVIASDVVIT MFLTSSISAA
101: LSIAYVGKKG NSYAGWLPIC DQVPNYCNHV TGALAAGFIG VVLYMVLLQY SIYTKCCKSS S
101: LSIAYVGKKG NSYAGWLPIC DQVPNYCNHV TGALAAGFIG VVLYMVLLQY SIYTKCCKSS S
001: MVKLTKRIGG LVLRLAAFGA ALAALIVMIT SRERASFLAI SLEAKYTDMA AFKYFVIANA VVSVYSFLVL FLPKESLLWK FVVVLDLVMT MLLTSSLSAA
101: LAVAQVGKKG NANAGWLPIC GQVPKFCDQI TGALIAGFVA LVLYVLLLLY SLHAVVDPFL LQKS
101: LAVAQVGKKG NANAGWLPIC GQVPKFCDQI TGALIAGFVA LVLYVLLLLY SLHAVVDPFL LQKS
Arabidopsis Description
CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178V2N5]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.