Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010038_P001 | Maize | plasma membrane | 94.44 | 93.86 |
| TraesCS7D01G130400.1 | Wheat | plasma membrane | 71.6 | 71.6 |
| TraesCS7B01G031400.1 | Wheat | plasma membrane | 70.99 | 70.99 |
| TraesCS7A01G131000.1 | Wheat | plasma membrane | 70.99 | 70.99 |
| HORVU7Hr1G027410.1 | Barley | extracellular, plasma membrane | 69.75 | 69.75 |
| Os05t0245300-01 | Rice | mitochondrion, plasma membrane | 67.9 | 67.9 |
| GSMUA_Achr6P13870_001 | Banana | extracellular, plasma membrane | 51.23 | 51.88 |
| CDY21972 | Canola | extracellular, plasma membrane | 50.0 | 49.39 |
| CDY48566 | Canola | extracellular, plasma membrane | 50.0 | 49.39 |
| Bra034215.1-P | Field mustard | extracellular, plasma membrane | 50.0 | 49.39 |
| KRH50041 | Soybean | plasma membrane | 48.77 | 49.38 |
| AT4G03540.1 | Thale cress | extracellular, plasma membrane, vacuole | 48.77 | 48.17 |
| VIT_12s0028g03760.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 46.91 | 47.2 |
| AT1G03700.1 | Thale cress | plasma membrane | 45.68 | 45.12 |
| CDX89875 | Canola | extracellular, plasma membrane, vacuole | 45.68 | 45.12 |
| CDY18177 | Canola | extracellular, plasma membrane, vacuole | 45.68 | 45.12 |
| PGSC0003DMT400076357 | Potato | extracellular | 43.83 | 43.83 |
| Solyc02g078250.2.1 | Tomato | extracellular | 43.83 | 43.83 |
| Bra015256.1-P | Field mustard | extracellular, plasma membrane, vacuole | 45.68 | 42.29 |
| CDY70062 | Canola | extracellular | 30.86 | 41.67 |
| GSMUA_Achr3P03240_001 | Banana | plasma membrane | 50.0 | 41.33 |
| KRH25574 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 41.36 | 41.1 |
| KRH55963 | Soybean | extracellular | 39.51 | 39.26 |
| KRH72716 | Soybean | extracellular | 29.63 | 34.04 |
| KRH17069 | Soybean | extracellular, plasma membrane, vacuole | 33.95 | 32.93 |
| EES17365 | Sorghum | plastid | 31.48 | 24.17 |
| EER98393 | Sorghum | endoplasmic reticulum, plasma membrane, plastid, vacuole | 25.31 | 20.4 |
| EES02949 | Sorghum | plastid | 24.07 | 17.57 |
Protein Annotations
| MapMan:35.1 | EntrezGene:8066658 | InterPro:CASP/CASPL | InterPro:CASP_dom | EnsemblPlants:EES19280 | ProteinID:EES19280 |
| ProteinID:EES19280.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009741 | GO:GO:0009826 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0035264 |
| GO:GO:0040007 | GO:GO:0051536 | PFAM:PF04535 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF218 | EnsemblPlantsGene:SORBI_3009G088900 |
| unigene:Sbi.13244 | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI0001A88843 | RefSeq:XP_002440850.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:-:15394040..15395259
Molecular Weight (calculated)
16989.2 Da
IEP (calculated)
7.989
GRAVY (calculated)
1.019
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKLHRLISA VLRLAAAGAA AAAAIIMVTS HETTSFFGIE MEAKYSYTPS FVFFVVAFAV AFAYSLLALL ARPGSTASRL LLLSDVMVGM LLTGAVAATG
101: AISQVGKSGN EHAGWLPICA QVQAYCSHVM GALIAGFVSL LLYFLIIMYS LHAVAEPLCS CH
101: AISQVGKSGN EHAGWLPICA QVQAYCSHVM GALIAGFVSL LLYFLIIMYS LHAVAEPLCS CH
001: MVKLTQRLGG LVLRFAAFCA ALGAVIAMIT SRERSSFFVI SLVAKYSDLA AFKYFVIANA IVTVYSFLVL FLPKESLLWK FVVVLDLMVT MLLTSSLSAA
101: VAVAQVGKRG NANAGWLPIC GQVPRFCDQI TGALIAGLVA LVLYVFLLIF SIHHVVDPFL LRKS
101: VAVAQVGKRG NANAGWLPIC GQVPRFCDQI TGALIAGLVA LVLYVFLLIF SIHHVVDPFL LRKS
Arabidopsis Description
CASP-like protein 1C2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR57]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.