Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076357 | Potato | extracellular | 96.91 | 96.91 |
| KRH50041 | Soybean | plasma membrane | 56.17 | 56.88 |
| GSMUA_Achr6P13870_001 | Banana | extracellular, plasma membrane | 46.3 | 46.88 |
| EES19280 | Sorghum | extracellular, plasma membrane, vacuole | 43.83 | 43.83 |
| TraesCS7D01G130400.1 | Wheat | plasma membrane | 41.98 | 41.98 |
| Os01t0237000-01 | Rice | golgi, plasma membrane, vacuole | 41.36 | 41.36 |
| Zm00001d010038_P001 | Maize | plasma membrane | 41.36 | 41.1 |
| HORVU7Hr1G027410.1 | Barley | extracellular, plasma membrane | 40.74 | 40.74 |
| TraesCS3D01G167400.1 | Wheat | plasma membrane | 38.89 | 40.38 |
| TraesCS7B01G031400.1 | Wheat | plasma membrane | 40.12 | 40.12 |
| TraesCS7A01G131000.1 | Wheat | plasma membrane | 40.12 | 40.12 |
| TraesCS3B01G190800.1 | Wheat | mitochondrion | 38.27 | 39.74 |
| TraesCS3A01G160200.1 | Wheat | plasma membrane | 37.65 | 39.1 |
| HORVU3Hr1G032350.1 | Barley | plasma membrane | 37.04 | 38.46 |
| GSMUA_Achr3P03240_001 | Banana | plasma membrane | 45.68 | 37.76 |
| Os05t0245300-01 | Rice | mitochondrion, plasma membrane | 35.8 | 35.8 |
| Solyc06g072530.2.1 | Tomato | extracellular, plasma membrane, plastid | 31.48 | 27.42 |
| Solyc03g097720.2.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid, vacuole | 30.25 | 27.07 |
| Solyc01g067330.2.1 | Tomato | plasma membrane | 30.86 | 26.32 |
| Solyc06g072550.2.1 | Tomato | plasma membrane | 27.78 | 25.28 |
| Solyc02g069730.2.1 | Tomato | plasma membrane | 29.63 | 24.62 |
| Solyc03g097730.1.1 | Tomato | extracellular, plasma membrane, vacuole | 25.93 | 23.6 |
| Solyc01g067300.2.1 | Tomato | cytosol | 28.4 | 23.47 |
| Solyc09g074550.2.1 | Tomato | extracellular | 21.6 | 21.74 |
Protein Annotations
| EnsemblPlants:Solyc02g078250.2.1 | EnsemblPlantsGene:Solyc02g078250.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0051536 | InterPro:CASP/CASPL | InterPro:CASP_dom |
| PANTHER:PTHR11615 | PANTHER:PTHR11615:SF218 | PFAM:PF04535 | SEG:seg | SignalP:SignalP-TM | TIGRFAMs:TIGR01569 |
| TMHMM:TMhelix | UniParc:UPI00027680D7 | UniProt:K4B950 | MapMan:35.1 | : | : |
Description
CASP-like protein [Source:UniProtKB/TrEMBL;Acc:K4B950]
Coordinates
chr2:-:42997026..42998361
Molecular Weight (calculated)
17553.2 Da
IEP (calculated)
10.240
GRAVY (calculated)
0.934
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLANRITIF LLRLLALGAS VAATIIMVTS HDSAQVLGMT FEAKFANTPT FKYFVGVNIL ASGYSLIVLF FPTKKMLGRI LLITDILMTL LLDSSISACL
101: AIAQVGKKGN THAGWLPICG QVPKFCDRVT GSLIAGFAAA ILYFLLLLFS FRNVLNLYTL KA
101: AIAQVGKKGN THAGWLPICG QVPKFCDRVT GSLIAGFAAA ILYFLLLLFS FRNVLNLYTL KA
001: MVKLTKRIGG LVLRLAAFGA ALAALIVMIT SRERASFLAI SLEAKYTDMA AFKYFVIANA VVSVYSFLVL FLPKESLLWK FVVVLDLVMT MLLTSSLSAA
101: LAVAQVGKKG NANAGWLPIC GQVPKFCDQI TGALIAGFVA LVLYVLLLLY SLHAVVDPFL LQKS
101: LAVAQVGKKG NANAGWLPIC GQVPKFCDQI TGALIAGFVA LVLYVLLLLY SLHAVVDPFL LQKS
Arabidopsis Description
CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178V2N5]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.