Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 4
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400058378 | Potato | plasma membrane | 93.68 | 91.75 |
| AT4G15630.1 | Thale cress | plasma membrane | 47.89 | 47.89 |
| Bra012775.1-P | Field mustard | plasma membrane | 45.79 | 45.79 |
| CDX90578 | Canola | plasma membrane | 45.79 | 45.79 |
| Solyc09g074550.2.1 | Tomato | extracellular | 38.42 | 45.34 |
| CDY09749 | Canola | plasma membrane | 45.26 | 45.26 |
| CDY22743 | Canola | plasma membrane | 45.26 | 45.26 |
| CDY09075 | Canola | plasma membrane | 44.74 | 44.74 |
| Bra038078.1-P | Field mustard | plasma membrane | 45.26 | 44.56 |
| AT4G15620.1 | Thale cress | plasma membrane | 41.05 | 41.05 |
| GSMUA_Achr3P23880_001 | Banana | golgi, plasma membrane, vacuole | 40.53 | 39.09 |
| TraesCS7D01G381200.1 | Wheat | plastid | 37.89 | 35.82 |
| HORVU7Hr1G091440.2 | Barley | plastid | 37.37 | 35.5 |
| TraesCS7B01G287500.1 | Wheat | plastid | 36.32 | 34.85 |
| TraesCS7A01G384700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 36.32 | 34.16 |
| GSMUA_Achr9P30940_001 | Banana | endoplasmic reticulum, plasma membrane | 33.16 | 33.51 |
| Solyc01g067300.2.1 | Tomato | cytosol | 33.16 | 32.14 |
| GSMUA_Achr1P14720_001 | Banana | vacuole | 32.63 | 32.12 |
| Zm00001d040807_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane, plastid | 35.79 | 30.91 |
| Solyc02g078250.2.1 | Tomato | extracellular | 26.32 | 30.86 |
| Os01t0363300-01 | Rice | golgi, plasma membrane, plastid | 34.74 | 30.7 |
| EES02949 | Sorghum | plastid | 35.79 | 30.63 |
| Solyc02g069730.2.1 | Tomato | plasma membrane | 31.05 | 30.26 |
| Solyc06g072530.2.1 | Tomato | extracellular, plasma membrane, plastid | 28.95 | 29.57 |
| GSMUA_Achr5P00440_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 31.05 | 29.35 |
| Solyc06g072550.2.1 | Tomato | plasma membrane | 26.84 | 28.65 |
| Solyc03g097720.2.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid, vacuole | 26.84 | 28.18 |
| Solyc03g097730.1.1 | Tomato | extracellular, plasma membrane, vacuole | 21.05 | 22.47 |
Protein Annotations
| EnsemblPlants:Solyc01g067330.2.1 | EnsemblPlantsGene:Solyc01g067330.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0051536 | InterPro:CASP/CASPL | InterPro:CASP_dom |
| PANTHER:PTHR11615 | PANTHER:PTHR11615:SF150 | PFAM:PF04535 | SEG:seg | TIGRFAMs:TIGR01569 | TMHMM:TMhelix |
| UniParc:UPI0002762F67 | UniProt:K4AWY2 | MapMan:35.1 | : | : | : |
Description
CASP-like protein [Source:UniProtKB/TrEMBL;Acc:K4AWY2]
Coordinates
chr1:+:75805303..75807770
Molecular Weight (calculated)
20473.8 Da
IEP (calculated)
10.142
GRAVY (calculated)
0.892
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: METESHTIAK EIGVANKQTI RWNDFVLRFL AFVVTLVAAI VLGVSKQNEL VPVQLVPTLP PINVPASAKW SHMSAFVYFV IVNAIACAYA VISLVLSLAN
101: KGKTKGLSLT IILFDLIMMA LLYSSVGAAA AVGLIGYKGN THVRWNKVCD VFGKFCGQVV AAIAISLVGS ILFLLLVLLA TVNLHKNIRH
101: KGKTKGLSLT IILFDLIMMA LLYSSVGAAA AVGLIGYKGN THVRWNKVCD VFGKFCGQVV AAIAISLVGS ILFLLLVLLA TVNLHKNIRH
001: MEHESKNKVD GMEMEKGKKE SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVPIKLI PTLPPLNVST TAKASYLSAF VYNISANAIA CGYTAISIVI
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP
Arabidopsis Description
CASP-like protein 1E1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.