Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- endoplasmic reticulum 2
- golgi 2
- nucleus 1
- extracellular 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G381200.1 | Wheat | plastid | 95.0 | 94.53 |
| TraesCS7B01G287500.1 | Wheat | plastid | 93.5 | 94.44 |
| TraesCS7A01G384700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 92.5 | 91.58 |
| Zm00001d040807_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane, plastid | 75.5 | 68.64 |
| EES02949 | Sorghum | plastid | 76.0 | 68.47 |
| Os01t0363300-01 | Rice | golgi, plasma membrane, plastid | 67.5 | 62.79 |
| GSMUA_Achr3P23880_001 | Banana | golgi, plasma membrane, vacuole | 45.0 | 45.69 |
| VIT_05s0020g01820.t01 | Wine grape | cytosol, plasma membrane, vacuole | 39.0 | 40.0 |
| KRH50920 | Soybean | cytosol, plasma membrane, vacuole | 37.0 | 39.36 |
| VIT_07s0104g01350.t01 | Wine grape | cytosol | 39.0 | 38.61 |
| PGSC0003DMT400058378 | Potato | plasma membrane | 36.5 | 37.63 |
| KRH02204 | Soybean | cytosol, plasma membrane, vacuole | 35.0 | 37.43 |
| CDY09075 | Canola | plasma membrane | 35.5 | 37.37 |
| Solyc01g067330.2.1 | Tomato | plasma membrane | 35.5 | 37.37 |
| CDY22743 | Canola | plasma membrane | 35.5 | 37.37 |
| Bra038078.1-P | Field mustard | plasma membrane | 35.5 | 36.79 |
| Bra012775.1-P | Field mustard | plasma membrane | 34.5 | 36.32 |
| CDX90578 | Canola | plasma membrane | 34.5 | 36.32 |
| AT4G15630.1 | Thale cress | plasma membrane | 34.0 | 35.79 |
| CDY09749 | Canola | plasma membrane | 34.0 | 35.79 |
| KRH11251 | Soybean | plasma membrane | 36.0 | 35.64 |
| Solyc09g074550.2.1 | Tomato | extracellular | 28.5 | 35.4 |
| AT4G15620.1 | Thale cress | plasma membrane | 33.5 | 35.26 |
| HORVU3Hr1G032350.1 | Barley | plasma membrane | 27.5 | 35.26 |
| KRG96380 | Soybean | plasma membrane | 32.5 | 33.16 |
| KRH68112 | Soybean | plasma membrane | 32.0 | 33.16 |
| PGSC0003DMT400029522 | Potato | plasma membrane | 31.5 | 31.34 |
| HORVU7Hr1G027410.1 | Barley | extracellular, plasma membrane | 22.5 | 27.78 |
| HORVU1Hr1G062380.3 | Barley | plastid | 25.0 | 23.04 |
Protein Annotations
| EMBL:AK367594 | EnsemblPlants:HORVU7Hr1G091440.2 | EnsemblPlantsGene:HORVU7Hr1G091440 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:CASP/CASPL | InterPro:CASP_dom | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF150 |
| PFAM:PF04535 | SEG:seg | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI000200729B | UniProt:F2DUM6 |
| MapMan:35.1 | : | : | : | : | : |
Description
CASP-like protein [Source:UniProtKB/TrEMBL;Acc:F2DUM6]
Coordinates
chrchr7H:-:559400729..559403941
Molecular Weight (calculated)
20967.7 Da
IEP (calculated)
9.517
GRAVY (calculated)
0.712
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSRVKPGF SGVSSLSDSR RSYMGAAAPS KPAVDGCGVA LRVFILAATL VAAVVMGLDR QTSTVQVTIA DKLPPLQVPV TAKWSYSSAF VYFVVANAMA
101: CVFSAVALAA CRSRSAVAPL MVGDLVVLAL LFSAVGAAAE FGILGERGNS HVRWGKVCHV YSQFCGRAMA AVIVSLVAAF ANLVHLMFAI LDVHKNSSYY
101: CVFSAVALAA CRSRSAVAPL MVGDLVVLAL LFSAVGAAAE FGILGERGNS HVRWGKVCHV YSQFCGRAMA AVIVSLVAAF ANLVHLMFAI LDVHKNSSYY
001: MEHESKNKVD GMEMEKGKKE SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVPIKLI PTLPPLNVST TAKASYLSAF VYNISANAIA CGYTAISIVI
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP
Arabidopsis Description
CASP-like protein 1E1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.