Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH02204 | Soybean | cytosol, plasma membrane, vacuole | 54.87 | 57.22 |
| KRH50920 | Soybean | cytosol, plasma membrane, vacuole | 54.36 | 56.38 |
| Bra012775.1-P | Field mustard | plasma membrane | 50.26 | 51.58 |
| CDX90578 | Canola | plasma membrane | 50.26 | 51.58 |
| KRH11251 | Soybean | plasma membrane | 53.33 | 51.49 |
| AT4G15630.1 | Thale cress | plasma membrane | 49.74 | 51.05 |
| CDY09749 | Canola | plasma membrane | 49.74 | 51.05 |
| CDY22743 | Canola | plasma membrane | 48.21 | 49.47 |
| VIT_07s0104g01350.t01 | Wine grape | cytosol | 50.77 | 49.01 |
| CDY09075 | Canola | plasma membrane | 47.69 | 48.95 |
| AT4G15620.1 | Thale cress | plasma membrane | 47.69 | 48.95 |
| Bra038078.1-P | Field mustard | plasma membrane | 48.21 | 48.7 |
| GSMUA_Achr3P23880_001 | Banana | golgi, plasma membrane, vacuole | 40.51 | 40.1 |
| TraesCS7D01G381200.1 | Wheat | plastid | 41.03 | 39.8 |
| TraesCS7B01G287500.1 | Wheat | plastid | 40.0 | 39.39 |
| HORVU7Hr1G091440.2 | Barley | plastid | 40.0 | 39.0 |
| TraesCS7A01G384700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 40.0 | 38.61 |
| GSMUA_Achr9P30940_001 | Banana | endoplasmic reticulum, plasma membrane | 33.33 | 34.57 |
| EES02949 | Sorghum | plastid | 37.95 | 33.33 |
| Zm00001d040807_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane, plastid | 37.44 | 33.18 |
| Os01t0363300-01 | Rice | golgi, plasma membrane, plastid | 36.41 | 33.02 |
| GSMUA_Achr5P00440_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 33.85 | 32.84 |
| GSMUA_Achr1P14720_001 | Banana | vacuole | 29.74 | 30.05 |
| VIT_12s0028g03760.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 24.62 | 29.81 |
| VIT_10s0092g00220.t01 | Wine grape | cytosol, plasma membrane, vacuole | 29.23 | 27.94 |
| VIT_17s0000g00560.t01 | Wine grape | endoplasmic reticulum | 26.67 | 25.24 |
| VIT_05s0020g01830.t01 | Wine grape | cytosol | 26.67 | 25.0 |
| VIT_14s0068g01400.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid, vacuole | 27.18 | 23.04 |
Protein Annotations
| EntrezGene:100251170 | wikigene:100251170 | MapMan:35.1 | UniProt:A7NW78 | InterPro:CASP/CASPL | InterPro:CASP_dom |
| ProteinID:CCB50342 | ProteinID:CCB50342.1 | EMBL:EE070589 | EMBL:FN595749 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0051536 |
| EntrezGene:LOC100251170 | wikigene:LOC100251170 | PFAM:PF04535 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF150 | TIGRFAMs:TIGR01569 |
| TMHMM:TMhelix | UniParc:UPI00015C7CAB | ArrayExpress:VIT_05s0020g01820 | EnsemblPlantsGene:VIT_05s0020g01820 | EnsemblPlants:VIT_05s0020g01820.t01 | unigene:Vvi.4589 |
| RefSeq:XP_002276206 | RefSeq:XP_002276206.1 | SEG:seg | : | : | : |
Description
CASP-like protein 1E2 [Source:UniProtKB/Swiss-Prot;Acc:A7NW78]
Coordinates
chr5:-:3539749..3541944
Molecular Weight (calculated)
20654.9 Da
IEP (calculated)
10.356
GRAVY (calculated)
0.734
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVESKTSFG GMESKSKEVK VVTGGKLRPF DLVLRVVALA LTLVAAVLLG VDKQTKVVSL QLLPTLPPMD VPVTAKWRYL SAFVYFVVSN AIACSYAALS
101: LLLSVGNSKG NKGLGLAITV MDLVMVALLF SSNGAAGAIG LMGYEGNSRV RWGKVCNVFG KFCNQVAVAL GLSFFGGLAF FLLVVMAAFA LNKRH
101: LLLSVGNSKG NKGLGLAITV MDLVMVALLF SSNGAAGAIG LMGYEGNSRV RWGKVCNVFG KFCNQVAVAL GLSFFGGLAF FLLVVMAAFA LNKRH
001: MEHESKNKVD GMEMEKGKKE SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVPIKLI PTLPPLNVST TAKASYLSAF VYNISANAIA CGYTAISIVI
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP
Arabidopsis Description
CASP-like protein 1E1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.