Factsheet for Bra038078.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
peroxisome 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi, peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22743	Canola	plasma membrane	98.45	100.0
CDY09075	Canola	plasma membrane	96.37	97.89
Bra012775.1-P	Field mustard	plasma membrane	86.01	87.37
AT4G15630.1	Thale cress	plasma membrane	81.35	82.63
AT4G15620.1	Thale cress	plasma membrane	78.76	80.0
VIT_05s0020g01820.t01	Wine grape	cytosol, plasma membrane, vacuole	48.7	48.21
PGSC0003DMT400058378	Potato	plasma membrane	45.6	45.36
Solyc01g067330.2.1	Tomato	plasma membrane	44.56	45.26
KRH02204	Soybean	cytosol, plasma membrane, vacuole	41.97	43.32
KRH50920	Soybean	cytosol, plasma membrane, vacuole	41.97	43.09
VIT_07s0104g01350.t01	Wine grape	cytosol	45.08	43.07
GSMUA_Achr3P23880_001	Banana	golgi, plasma membrane, vacuole	41.97	41.12
KRH11251	Soybean	plasma membrane	41.97	40.1
Solyc09g074550.2.1	Tomato	extracellular	31.61	37.89
KRH68112	Soybean	plasma membrane	37.82	37.82
KRG96380	Soybean	plasma membrane	38.34	37.76
TraesCS7D01G381200.1	Wheat	plastid	37.82	36.32
TraesCS7B01G287500.1	Wheat	plastid	36.79	35.86
HORVU7Hr1G091440.2	Barley	plastid	36.79	35.5
TraesCS7A01G384700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	36.79	35.15
PGSC0003DMT400029522	Potato	plasma membrane	36.27	34.83
Zm00001d040807_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane, plastid	37.31	32.73
Os01t0363300-01	Rice	golgi, plasma membrane, plastid	36.27	32.56
EES02949	Sorghum	plastid	37.31	32.43
GSMUA_Achr9P30940_001	Banana	endoplasmic reticulum, plasma membrane	31.09	31.91
GSMUA_Achr5P00440_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	29.02	27.86
GSMUA_Achr1P14720_001	Banana	vacuole	27.46	27.46
Bra034215.1-P	Field mustard	extracellular, plasma membrane	23.32	27.44
Bra033751.1-P	Field mustard	plasma membrane	25.91	26.04
Bra012777.1-P	Field mustard	plasma membrane	25.91	25.91
Bra015256.1-P	Field mustard	extracellular, plasma membrane, vacuole	22.8	25.14
Bra010476.1-P	Field mustard	extracellular, plasma membrane	21.76	25.0
Bra039516.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	25.39	24.75
Bra019194.1-P	Field mustard	extracellular, plasma membrane, vacuole	21.24	24.12
Bra020752.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	24.87	23.41
Bra013858.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	19.17	21.89

Protein Annotations

EnsemblPlants:Bra038078.1	EnsemblPlants:Bra038078.1-P	EnsemblPlantsGene:Bra038078	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0016021	InterPro:CASP/CASPL	InterPro:CASP_dom	PANTHER:PTHR11615	PANTHER:PTHR11615:SF150
PFAM:PF04535	SEG:seg	TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI0002545BF7	UniProt:M4FAG4
MapMan:35.1	:	:	:	:	:

Description

AT4G15630 (E=1e-076) | integral membrane family protein

Coordinates

chrA08:+:6695297..6697444

Molecular Weight (calculated)

20431.9 Da

IEP (calculated)

10.450

GRAVY (calculated)

0.626

Length

193 amino acids

Sequence
(BLAST)

001: MEHERKNNLN GMEMEKGNKE SGSRKGLELT MRVLALVLSL TAATVLGVAK QTKVVSITLI PTLPPLDVSA TAKASYLSAF VFNISANAIA CGYTAISIAI
101: LMVSKGRRSK GLIMAVLIGD LVMMALLFSS TGAAGAIGLM GVQGNKHVMW KKVCNVFGKF CHQTAASVAI TLLAAIMFMV LVVLDAMKLP QCK

Best Arabidopsis Sequence Match ( AT4G15630.1 )
(BLAST)

001: MEHESKNKVD GMEMEKGKKE SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVPIKLI PTLPPLNVST TAKASYLSAF VYNISANAIA CGYTAISIVI
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP

Arabidopsis Description

CASP-like protein 1E1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.