Factsheet for Bra012775.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
peroxisome 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi, peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90578	Canola	plasma membrane	99.47	99.47
AT4G15630.1	Thale cress	plasma membrane	86.84	86.84
Bra038078.1-P	Field mustard	plasma membrane	87.37	86.01
AT4G15620.1	Thale cress	plasma membrane	83.68	83.68
VIT_05s0020g01820.t01	Wine grape	cytosol, plasma membrane, vacuole	51.58	50.26
KRH02204	Soybean	cytosol, plasma membrane, vacuole	45.79	46.52
KRH50920	Soybean	cytosol, plasma membrane, vacuole	45.79	46.28
PGSC0003DMT400058378	Potato	plasma membrane	46.84	45.88
Solyc01g067330.2.1	Tomato	plasma membrane	45.79	45.79
GSMUA_Achr3P23880_001	Banana	golgi, plasma membrane, vacuole	47.37	45.69
VIT_07s0104g01350.t01	Wine grape	cytosol	47.37	44.55
KRH11251	Soybean	plasma membrane	46.32	43.56
Solyc09g074550.2.1	Tomato	extracellular	33.68	39.75
KRH68112	Soybean	plasma membrane	38.95	38.34
KRG96380	Soybean	plasma membrane	38.95	37.76
PGSC0003DMT400029522	Potato	plasma membrane	39.47	37.31
TraesCS7B01G287500.1	Wheat	plastid	36.84	35.35
TraesCS7D01G381200.1	Wheat	plastid	37.37	35.32
TraesCS7A01G384700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	36.84	34.65
GSMUA_Achr9P30940_001	Banana	endoplasmic reticulum, plasma membrane	34.21	34.57
HORVU7Hr1G091440.2	Barley	plastid	36.32	34.5
Zm00001d040807_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane, plastid	37.89	32.73
EES02949	Sorghum	plastid	37.89	32.43
Os01t0363300-01	Rice	golgi, plasma membrane, plastid	36.32	32.09
GSMUA_Achr1P14720_001	Banana	vacuole	28.95	28.5
Bra012777.1-P	Field mustard	plasma membrane	28.95	28.5
GSMUA_Achr5P00440_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	30.0	28.36
Bra034215.1-P	Field mustard	extracellular, plasma membrane	23.68	27.44
Bra033751.1-P	Field mustard	plasma membrane	26.84	26.56
Bra015256.1-P	Field mustard	extracellular, plasma membrane, vacuole	23.16	25.14
Bra039516.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	25.79	24.75
Bra020752.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	25.79	23.9
Bra010476.1-P	Field mustard	extracellular, plasma membrane	20.0	22.62
Bra019194.1-P	Field mustard	extracellular, plasma membrane, vacuole	20.0	22.35
Bra013858.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	17.89	20.12

Protein Annotations

EnsemblPlants:Bra012775.1	EnsemblPlants:Bra012775.1-P	EnsemblPlantsGene:Bra012775	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0016021	InterPro:CASP/CASPL	InterPro:CASP_dom	PANTHER:PTHR11615	PANTHER:PTHR11615:SF150
PFAM:PF04535	TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI0002540834	UniProt:M4D8G5	MapMan:35.1

Description

AT4G15630 (E=7e-088) | integral membrane family protein

Coordinates

chrA03:+:22339595..22340823

Molecular Weight (calculated)

20092.6 Da

IEP (calculated)

10.483

GRAVY (calculated)

0.626

Length

190 amino acids

Sequence
(BLAST)

001: MEQERKNNMN GMEMEKGKRE SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVSIKLI PTLPPLDVST TAKASYLSAF VYNISANAIA CGYAAISIAV
101: LMICKGRRSK GLLMAVLIGD LVMVGLLFSG TGAAGAIGLM GSQGNKHVMW KKVCNVFGKF CHQAAASVAI TLIASIVFML LVVLDAMKLP

Best Arabidopsis Sequence Match ( AT4G15630.1 )
(BLAST)

001: MEHESKNKVD GMEMEKGKKE SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVPIKLI PTLPPLNVST TAKASYLSAF VYNISANAIA CGYTAISIVI
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP

Arabidopsis Description

CASP-like protein 1E1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.