Factsheet for VIT_07s0104g01350.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g01820.t01	Wine grape	cytosol, plasma membrane, vacuole	49.01	50.77
KRH68112	Soybean	plasma membrane	47.52	49.74
KRG96380	Soybean	plasma membrane	47.52	48.98
Bra012775.1-P	Field mustard	plasma membrane	44.55	47.37
CDY09749	Canola	plasma membrane	44.55	47.37
Solyc09g074550.2.1	Tomato	extracellular	37.62	47.2
CDX90578	Canola	plasma membrane	44.06	46.84
AT4G15630.1	Thale cress	plasma membrane	43.56	46.32
CDY22743	Canola	plasma membrane	43.07	45.79
AT4G15620.1	Thale cress	plasma membrane	42.57	45.26
CDY09075	Canola	plasma membrane	42.57	45.26
Bra038078.1-P	Field mustard	plasma membrane	43.07	45.08
GSMUA_Achr3P23880_001	Banana	golgi, plasma membrane, vacuole	43.07	44.16
PGSC0003DMT400029522	Potato	plasma membrane	41.09	41.29
TraesCS7B01G287500.1	Wheat	plastid	39.11	39.9
TraesCS7D01G381200.1	Wheat	plastid	39.6	39.8
HORVU7Hr1G091440.2	Barley	plastid	38.61	39.0
TraesCS7A01G384700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	38.61	38.61
Zm00001d040807_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane, plastid	39.6	36.36
EES02949	Sorghum	plastid	39.6	36.04
Os01t0363300-01	Rice	golgi, plasma membrane, plastid	36.63	34.42
GSMUA_Achr1P14720_001	Banana	vacuole	32.18	33.68
GSMUA_Achr9P30940_001	Banana	endoplasmic reticulum, plasma membrane	30.2	32.45
GSMUA_Achr5P00440_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	31.68	31.84
VIT_12s0028g03760.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	23.76	29.81
VIT_05s0020g01830.t01	Wine grape	cytosol	28.22	27.4
VIT_10s0092g00220.t01	Wine grape	cytosol, plasma membrane, vacuole	27.23	26.96
VIT_17s0000g00560.t01	Wine grape	endoplasmic reticulum	26.24	25.73
VIT_14s0068g01400.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid, vacuole	26.73	23.48

Protein Annotations

EntrezGene:100244310	wikigene:100244310	MapMan:35.1	UniProt:A7PTY8	EMBL:AM434020	ProteinID:CAN69352
ProteinID:CAN69352.1	InterPro:CASP/CASPL	InterPro:CASP_dom	ProteinID:CCB56770	ProteinID:CCB56770.1	EMBL:DV220385
EMBL:FN596005	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0016021	GO:GO:0051536	EntrezGene:LOC100244310	wikigene:LOC100244310	PFAM:PF04535
PANTHER:PTHR11615	PANTHER:PTHR11615:SF150	TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI00015CAC9B	ArrayExpress:VIT_07s0104g01350
EnsemblPlantsGene:VIT_07s0104g01350	EnsemblPlants:VIT_07s0104g01350.t01	RefSeq:XP_002268702	RefSeq:XP_002268702.1	SEG:seg	:

Description

CASP-like protein 1E1 [Source:UniProtKB/Swiss-Prot;Acc:A7PTY8]

Coordinates

chr7:+:2378465..2379712

Molecular Weight (calculated)

21470.8 Da

IEP (calculated)

10.032

GRAVY (calculated)

0.673

Length

202 amino acids

Sequence
(BLAST)

001: MESQCRPNVD GVHNGVESHV KVVEKPRSVG SSSEFVLRIL GLLLTLIAAV VAGVDKQTKI IPLTLIKTLP SLHVPVTAKW SDMSAFVYLV VSNAIACSYA
101: AISLVLVTML GRRGKGGRVL AVIVLDLHMV GLLFSANGAA TAVGVLGQYG NSHVEWKKVC NVFDSFCHHL VASLALSFLG SLSFLGLVLL AILNLHKKSS
201: TK

Best Arabidopsis Sequence Match ( AT4G15630.1 )
(BLAST)

001: MEHESKNKVD GMEMEKGKKE SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVPIKLI PTLPPLNVST TAKASYLSAF VYNISANAIA CGYTAISIVI
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP

Arabidopsis Description

CASP-like protein 1E1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.