Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 3
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09749 | Canola | plasma membrane | 83.68 | 83.68 |
| Bra012775.1-P | Field mustard | plasma membrane | 83.68 | 83.68 |
| CDX90578 | Canola | plasma membrane | 83.16 | 83.16 |
| AT4G15630.1 | Thale cress | plasma membrane | 81.58 | 81.58 |
| CDY22743 | Canola | plasma membrane | 80.0 | 80.0 |
| Bra038078.1-P | Field mustard | plasma membrane | 80.0 | 78.76 |
| CDY09075 | Canola | plasma membrane | 78.42 | 78.42 |
| VIT_05s0020g01820.t01 | Wine grape | cytosol, plasma membrane, vacuole | 48.95 | 47.69 |
| KRH02204 | Soybean | cytosol, plasma membrane, vacuole | 42.11 | 42.78 |
| VIT_07s0104g01350.t01 | Wine grape | cytosol | 45.26 | 42.57 |
| KRH50920 | Soybean | cytosol, plasma membrane, vacuole | 42.11 | 42.55 |
| PGSC0003DMT400058378 | Potato | plasma membrane | 43.16 | 42.27 |
| Solyc09g074550.2.1 | Tomato | extracellular | 35.26 | 41.61 |
| GSMUA_Achr3P23880_001 | Banana | golgi, plasma membrane, vacuole | 42.63 | 41.12 |
| Solyc01g067330.2.1 | Tomato | plasma membrane | 41.05 | 41.05 |
| KRH11251 | Soybean | plasma membrane | 42.63 | 40.1 |
| PGSC0003DMT400029522 | Potato | plasma membrane | 39.47 | 37.31 |
| KRH68112 | Soybean | plasma membrane | 37.37 | 36.79 |
| KRG96380 | Soybean | plasma membrane | 37.89 | 36.73 |
| TraesCS7D01G381200.1 | Wheat | plastid | 36.84 | 34.83 |
| TraesCS7B01G287500.1 | Wheat | plastid | 35.26 | 33.84 |
| TraesCS7A01G384700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 35.79 | 33.66 |
| HORVU7Hr1G091440.2 | Barley | plastid | 35.26 | 33.5 |
| GSMUA_Achr9P30940_001 | Banana | endoplasmic reticulum, plasma membrane | 32.11 | 32.45 |
| Os01t0363300-01 | Rice | golgi, plasma membrane, plastid | 36.32 | 32.09 |
| Zm00001d040807_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane, plastid | 35.79 | 30.91 |
| EES02949 | Sorghum | plastid | 35.26 | 30.18 |
| GSMUA_Achr1P14720_001 | Banana | vacuole | 29.47 | 29.02 |
| GSMUA_Achr5P00440_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 29.47 | 27.86 |
| AT4G03540.1 | Thale cress | extracellular, plasma membrane, vacuole | 23.68 | 27.44 |
| AT1G03700.1 | Thale cress | plasma membrane | 23.68 | 27.44 |
| AT4G25040.1 | Thale cress | extracellular, plasma membrane, vacuole | 23.68 | 26.47 |
| AT4G15610.1 | Thale cress | plasma membrane | 25.26 | 24.87 |
| AT5G44550.1 | Thale cress | plasma membrane | 25.26 | 24.37 |
| AT3G06390.1 | Thale cress | plasma membrane | 24.21 | 23.12 |
| AT4G20390.1 | Thale cress | extracellular, mitochondrion, plasma membrane, vacuole | 22.11 | 21.32 |
Protein Annotations
| MapMan:35.1 | EntrezGene:827239 | UniProt:A0A178V4A8 | ProteinID:AEE83629.1 | ArrayExpress:AT4G15620 | EnsemblPlantsGene:AT4G15620 |
| RefSeq:AT4G15620 | TAIR:AT4G15620 | RefSeq:AT4G15620-TAIR-G | EnsemblPlants:AT4G15620.1 | TAIR:AT4G15620.1 | EMBL:BT002974 |
| EMBL:BT004455 | ProteinID:CAB10340.1 | ProteinID:CAB78604.1 | InterPro:CASP/CASPL | InterPro:CASP_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0051536 | RefSeq:NP_193297.1 | UniProt:O23413 | ProteinID:OAO99721.1 | PFAM:PF04535 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020003 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF150 |
| TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI000000BE6B | SEG:seg | : | : |
Description
CASP-like protein 1E2 [Source:UniProtKB/Swiss-Prot;Acc:O23413]
Coordinates
chr4:+:8913653..8915663
Molecular Weight (calculated)
20314.0 Da
IEP (calculated)
10.688
GRAVY (calculated)
0.659
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHEGKNNMN GMEMEKGKRE LGSRKGVELT MRVLALILTM AAATVLGVAK QTKVVSIKLI PTLPPLDITT TAKASYLSAF VYNISVNAIA CGYTAISIAI
101: LMISRGRRSK KLLMVVLLGD LVMVALLFSG TGAASAIGLM GLHGNKHVMW KKVCGVFGKF CHRAAPSLPL TLLAAVVFMF LVVLDAIKLP
101: LMISRGRRSK KLLMVVLLGD LVMVALLFSG TGAASAIGLM GLHGNKHVMW KKVCGVFGKF CHRAAPSLPL TLLAAVVFMF LVVLDAIKLP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.