Factsheet for Zm00001d040807_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02949	Sorghum	plastid	87.73	86.94
TraesCS7B01G287500.1	Wheat	plastid	68.18	75.76
HORVU7Hr1G091440.2	Barley	plastid	68.64	75.5
TraesCS7A01G384700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	68.64	74.75
TraesCS7D01G381200.1	Wheat	plastid	68.18	74.63
Os01t0363300-01	Rice	golgi, plasma membrane, plastid	67.73	69.3
GSMUA_Achr3P23880_001	Banana	golgi, plasma membrane, vacuole	40.91	45.69
KRH50920	Soybean	cytosol, plasma membrane, vacuole	34.55	40.43
VIT_07s0104g01350.t01	Wine grape	cytosol	36.36	39.6
KRH02204	Soybean	cytosol, plasma membrane, vacuole	32.73	38.5
CDY22743	Canola	plasma membrane	32.73	37.89
CDY09075	Canola	plasma membrane	32.73	37.89
CDX90578	Canola	plasma membrane	32.73	37.89
Bra012775.1-P	Field mustard	plasma membrane	32.73	37.89
VIT_05s0020g01820.t01	Wine grape	cytosol, plasma membrane, vacuole	33.18	37.44
AT4G15630.1	Thale cress	plasma membrane	32.27	37.37
Bra038078.1-P	Field mustard	plasma membrane	32.73	37.31
CDY09749	Canola	plasma membrane	31.82	36.84
KRH11251	Soybean	plasma membrane	33.64	36.63
AT4G15620.1	Thale cress	plasma membrane	30.91	35.79
Solyc01g067330.2.1	Tomato	plasma membrane	30.91	35.79
PGSC0003DMT400058378	Potato	plasma membrane	31.36	35.57
Solyc09g074550.2.1	Tomato	extracellular	25.91	35.4
KRH68112	Soybean	plasma membrane	29.09	33.16
PGSC0003DMT400029522	Potato	plasma membrane	30.0	32.84
KRG96380	Soybean	plasma membrane	29.09	32.65
Zm00001d031047_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	25.45	27.32
Zm00001d019457_P001	Maize	endoplasmic reticulum, plasma membrane, plastid, vacuole	24.09	27.04
Zm00001d005158_P001	Maize	extracellular	24.55	26.6
Zm00001d010038_P001	Maize	plasma membrane	18.18	24.54

Protein Annotations

EntrezGene:100191924	MapMan:35.1	UniProt:A0A1R3PG96	UniProt:B4FAP1	EMBL:BT034179	EMBL:BT054362
InterPro:CASP/CASPL	InterPro:CASP_dom	EMBL:EU966666	EMBL:EU969891	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	ProteinID:ONM32073.1	PFAM:PF04535	PANTHER:PTHR11615
PANTHER:PTHR11615:SF150	TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI00017B6130	EnsemblPlantsGene:Zm00001d040807	EnsemblPlants:Zm00001d040807_P001
EnsemblPlants:Zm00001d040807_T001	SEG:seg	:	:	:	:

Description

CASP-like protein 4

Coordinates

chr3:-:67151874..67157763

Molecular Weight (calculated)

22727.0 Da

IEP (calculated)

9.456

GRAVY (calculated)

0.715

Length

220 amino acids

Sequence
(BLAST)

001: METPTPRVKP GFNGVGVGMG SSVNGSSRRA GYYMGPAGAV AVAGGGRAAA AAPVDGCSVA LRVFVLAATL VSAVVMGVDR QTSTIRITVT DALPPLEVPL
101: TANWSYSSAF VYFVVANAMV CLFSAAALAA CRSRAAMVPV MVGDLLALAL LYSAVGAAAE FGILGERGNS HVRWPKVCNV YGRFCERAMA AVIVSLIAAF
201: ANLVLLMLNI LTIHKSSSYY

Best Arabidopsis Sequence Match ( AT4G15630.1 )
(BLAST)

001: MEHESKNKVD GMEMEKGKKE SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVPIKLI PTLPPLNVST TAKASYLSAF VYNISANAIA CGYTAISIVI
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP

Arabidopsis Description

CASP-like protein 1E1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.