CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 1
golgi 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040807_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane, plastid	86.94	87.73
TraesCS7B01G287500.1	Wheat	plastid	68.02	76.26
HORVU7Hr1G091440.2	Barley	plastid	68.47	76.0
TraesCS7A01G384700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	68.02	74.75
TraesCS7D01G381200.1	Wheat	plastid	67.57	74.63
Os01t0363300-01	Rice	golgi, plasma membrane, plastid	66.67	68.84
GSMUA_Achr3P23880_001	Banana	golgi, plasma membrane, vacuole	40.54	45.69
KRH50920	Soybean	cytosol, plasma membrane, vacuole	35.14	41.49
VIT_07s0104g01350.t01	Wine grape	cytosol	36.04	39.6
KRH02204	Soybean	cytosol, plasma membrane, vacuole	33.33	39.57
VIT_05s0020g01820.t01	Wine grape	cytosol, plasma membrane, vacuole	33.33	37.95
Bra012775.1-P	Field mustard	plasma membrane	32.43	37.89
CDY22743	Canola	plasma membrane	32.43	37.89
CDY09075	Canola	plasma membrane	32.43	37.89
CDX90578	Canola	plasma membrane	32.43	37.89
KRH11251	Soybean	plasma membrane	34.23	37.62
AT4G15630.1	Thale cress	plasma membrane	31.98	37.37
Bra038078.1-P	Field mustard	plasma membrane	32.43	37.31
CDY09749	Canola	plasma membrane	31.53	36.84
Solyc01g067330.2.1	Tomato	plasma membrane	30.63	35.79
PGSC0003DMT400058378	Potato	plasma membrane	31.08	35.57
Solyc09g074550.2.1	Tomato	extracellular	25.68	35.4
AT4G15620.1	Thale cress	plasma membrane	30.18	35.26
KRH68112	Soybean	plasma membrane	28.83	33.16
KRG96380	Soybean	plasma membrane	28.83	32.65
PGSC0003DMT400029522	Potato	plasma membrane	29.28	32.34
EES17365	Sorghum	plastid	24.32	25.59
EES19280	Sorghum	extracellular, plasma membrane, vacuole	17.57	24.07
EER98393	Sorghum	endoplasmic reticulum, plasma membrane, plastid, vacuole	21.62	23.88

Protein Annotations

MapMan:35.1	EntrezGene:8086354	InterPro:CASP/CASPL	InterPro:CASP_dom	EnsemblPlants:EES02949	ProteinID:EES02949
ProteinID:EES02949.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0016021	GO:GO:0051536	PFAM:PF04535	PANTHER:PTHR11615	PANTHER:PTHR11615:SF150
EnsemblPlantsGene:SORBI_3003G162100	unigene:Sbi.12242	TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI0001A851CD	RefSeq:XP_002457829.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:19675798..19681085

Molecular Weight (calculated)

22975.1 Da

IEP (calculated)

9.381

GRAVY (calculated)

0.619

Length

222 amino acids

Sequence
(BLAST)

001: MEASRVKPGF NGVGMAAGSV NGSSRRPGPG LGYGYGYYMG SGAAAGGSGR AAQAPVDGCS VALRVFVVAS TLVSAVVMGV DRQTRTIQIT ITDALPPLEV
101: PLTANWSYSS AFVYFVVANA MVCLFSAAAL AACRSRAAMV PVMVGDLLAL ALLYSAVGAA AEFGILGERG NSHVRWAKVC NVYGRFCDRA MAAVIVSLIG
201: AFANLVLLML NILTIHKSSS YY

Best Arabidopsis Sequence Match ( AT4G15630.1 )
(BLAST)

001: MEHESKNKVD GMEMEKGKKE SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVPIKLI PTLPPLNVST TAKASYLSAF VYNISANAIA CGYTAISIVI
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP

Arabidopsis Description

CASP-like protein 1E1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.