Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- plasma membrane 3
- plastid 1
- endoplasmic reticulum 2
- vacuole 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400029522 | Potato | plasma membrane | 93.79 | 75.12 |
| Solyc01g067330.2.1 | Tomato | plasma membrane | 45.34 | 38.42 |
| VIT_07s0104g01350.t01 | Wine grape | cytosol | 47.2 | 37.62 |
| KRG96380 | Soybean | plasma membrane | 43.48 | 35.71 |
| AT4G15620.1 | Thale cress | plasma membrane | 41.61 | 35.26 |
| KRH68112 | Soybean | plasma membrane | 42.24 | 35.23 |
| Bra012775.1-P | Field mustard | plasma membrane | 39.75 | 33.68 |
| CDX90578 | Canola | plasma membrane | 39.75 | 33.68 |
| AT4G15630.1 | Thale cress | plasma membrane | 39.13 | 33.16 |
| CDY09749 | Canola | plasma membrane | 39.13 | 33.16 |
| GSMUA_Achr3P23880_001 | Banana | golgi, plasma membrane, vacuole | 40.37 | 32.99 |
| CDY22743 | Canola | plasma membrane | 37.89 | 32.11 |
| Bra038078.1-P | Field mustard | plasma membrane | 37.89 | 31.61 |
| CDY09075 | Canola | plasma membrane | 37.27 | 31.58 |
| TraesCS7B01G287500.1 | Wheat | plastid | 36.02 | 29.29 |
| TraesCS7D01G381200.1 | Wheat | plastid | 36.02 | 28.86 |
| HORVU7Hr1G091440.2 | Barley | plastid | 35.4 | 28.5 |
| TraesCS7A01G384700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 34.78 | 27.72 |
| Zm00001d040807_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane, plastid | 35.4 | 25.91 |
| EES02949 | Sorghum | plastid | 35.4 | 25.68 |
| GSMUA_Achr1P14720_001 | Banana | vacuole | 30.43 | 25.39 |
| Os01t0363300-01 | Rice | golgi, plasma membrane, plastid | 32.92 | 24.65 |
| GSMUA_Achr9P30940_001 | Banana | endoplasmic reticulum, plasma membrane | 28.57 | 24.47 |
| GSMUA_Achr5P00440_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 29.19 | 23.38 |
| Solyc03g097720.2.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid, vacuole | 25.47 | 22.65 |
| Solyc02g078250.2.1 | Tomato | extracellular | 21.74 | 21.6 |
| Solyc06g072550.2.1 | Tomato | plasma membrane | 22.98 | 20.79 |
| Solyc02g069730.2.1 | Tomato | plasma membrane | 23.6 | 19.49 |
| Solyc01g067300.2.1 | Tomato | cytosol | 22.98 | 18.88 |
| Solyc03g097730.1.1 | Tomato | extracellular, plasma membrane, vacuole | 19.25 | 17.42 |
| Solyc06g072530.2.1 | Tomato | extracellular, plasma membrane, plastid | 19.88 | 17.2 |
Protein Annotations
| EnsemblPlants:Solyc09g074550.2.1 | EnsemblPlantsGene:Solyc09g074550.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0051536 | InterPro:CASP/CASPL | InterPro:CASP_dom |
| PANTHER:PTHR11615 | PANTHER:PTHR11615:SF150 | PFAM:PF04535 | SEG:seg | TIGRFAMs:TIGR01569 | TMHMM:TMhelix |
| UniParc:UPI000276B588 | UniProt:K4CV32 | MapMan:35.1 | : | : | : |
Description
CASP-like protein [Source:UniProtKB/TrEMBL;Acc:K4CV32]
Coordinates
chr9:+:66371626..66373132
Molecular Weight (calculated)
17082.1 Da
IEP (calculated)
8.921
GRAVY (calculated)
0.878
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLIFTLIAA IVAGSNKDTE SVAISLVDGL PPLHLTLTAK WSYMSSTVYF VAVNAIACAY AAISMAFISL TGGRNSKGSI LVVGLDLAMV ALLFSANGAS
101: ASIGLIALNG NSHTQWHKVC YAFKRYCIQG GAALVLSMFG SFFFICIVLL FTYNLHRTTL N
101: ASIGLIALNG NSHTQWHKVC YAFKRYCIQG GAALVLSMFG SFFFICIVLL FTYNLHRTTL N
001: MEHEGKNNMN GMEMEKGKRE LGSRKGVELT MRVLALILTM AAATVLGVAK QTKVVSIKLI PTLPPLDITT TAKASYLSAF VYNISVNAIA CGYTAISIAI
101: LMISRGRRSK KLLMVVLLGD LVMVALLFSG TGAASAIGLM GLHGNKHVMW KKVCGVFGKF CHRAAPSLPL TLLAAVVFMF LVVLDAIKLP
101: LMISRGRRSK KLLMVVLLGD LVMVALLFSG TGAASAIGLM GLHGNKHVMW KKVCGVFGKF CHRAAPSLPL TLLAAVVFMF LVVLDAIKLP
Arabidopsis Description
CASP-like protein 1E2 [Source:UniProtKB/Swiss-Prot;Acc:O23413]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.