Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- endoplasmic reticulum 2
- plasma membrane 4
- extracellular 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069269 | Potato | plasma membrane | 96.63 | 96.63 |
| Solyc06g072530.2.1 | Tomato | extracellular, plasma membrane, plastid | 73.6 | 70.43 |
| Solyc03g097720.2.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid, vacuole | 56.18 | 55.25 |
| Solyc03g097730.1.1 | Tomato | extracellular, plasma membrane, vacuole | 51.69 | 51.69 |
| VIT_17s0000g00560.t01 | Wine grape | endoplasmic reticulum | 50.56 | 43.69 |
| Solyc02g078250.2.1 | Tomato | extracellular | 25.28 | 27.78 |
| Solyc01g067330.2.1 | Tomato | plasma membrane | 28.65 | 26.84 |
| Solyc09g074550.2.1 | Tomato | extracellular | 20.79 | 22.98 |
| Solyc02g069730.2.1 | Tomato | plasma membrane | 23.6 | 21.54 |
| Solyc01g067300.2.1 | Tomato | cytosol | 22.47 | 20.41 |
Protein Annotations
| EnsemblPlants:Solyc06g072550.2.1 | EnsemblPlantsGene:Solyc06g072550.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0051536 | InterPro:CASP/CASPL | InterPro:CASP_dom |
| PANTHER:PTHR11615 | PANTHER:PTHR11615:SF157 | PFAM:PF04535 | SEG:seg | TIGRFAMs:TIGR01569 | TMHMM:TMhelix |
| UniParc:UPI00027659A2 | UniProt:K4C8X5 | MapMan:35.1 | : | : | : |
Description
CASP-like protein [Source:UniProtKB/TrEMBL;Acc:K4C8X5]
Coordinates
chr6:-:44746337..44748775
Molecular Weight (calculated)
19840.7 Da
IEP (calculated)
9.154
GRAVY (calculated)
0.648
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPKNMQSSP LKPYKYLLGT QILLRFLATI FTLASTLIIL TSKQTVTIFG LEMDARYSYS SAFKFFAFAN MIGCAFSVLS LFLASVLGHK GLVPKNSFYM
101: FLHDLIVMAV LLAGCAAATA VGYIGKYGEM HSGWMPICEH VDKFCHKVTN SVILSYFAVF FYLCLTIISA NQSRHIQV
101: FLHDLIVMAV LLAGCAAATA VGYIGKYGEM HSGWMPICEH VDKFCHKVTN SVILSYFAVF FYLCLTIISA NQSRHIQV
001: MMGDNEGRRT PLLNLGVQVS MRVLTIGAAM ASMWVMITNR EVASVYGIAF EAKYSYSSAF RYLVYAQIAV CAATLFTLVW ACLAVRRRGL VFALFFFDLL
101: TTLTAISAFS AAFAEGYVGK YGNKQAGWLP ICGYVHGYCS RVTISLAMSF ASFILLFILT VLTASAARHY
101: TTLTAISAFS AAFAEGYVGK YGNKQAGWLP ICGYVHGYCS RVTISLAMSF ASFILLFILT VLTASAARHY
Arabidopsis Description
CASP-like protein 1F1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0L3]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.