Factsheet for TraesCS7A01G384700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, mitochondrion, plastid, plasma membrane, golgi

Predictor Summary:

plastid 2
golgi 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G287500.1	Wheat	plastid	95.54	97.47
TraesCS7D01G381200.1	Wheat	plastid	96.04	96.52
HORVU7Hr1G091440.2	Barley	plastid	91.58	92.5
Zm00001d040807_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane, plastid	74.75	68.64
EES02949	Sorghum	plastid	74.75	68.02
Os01t0363300-01	Rice	golgi, plasma membrane, plastid	68.32	64.19
GSMUA_Achr3P23880_001	Banana	golgi, plasma membrane, vacuole	44.06	45.18
VIT_05s0020g01820.t01	Wine grape	cytosol, plasma membrane, vacuole	38.61	40.0
KRH50920	Soybean	cytosol, plasma membrane, vacuole	36.63	39.36
VIT_07s0104g01350.t01	Wine grape	cytosol	38.61	38.61
KRH02204	Soybean	cytosol, plasma membrane, vacuole	34.65	37.43
CDY22743	Canola	plasma membrane	35.15	37.37
CDY09075	Canola	plasma membrane	35.15	37.37
CDX90578	Canola	plasma membrane	34.65	36.84
Bra012775.1-P	Field mustard	plasma membrane	34.65	36.84
Bra038078.1-P	Field mustard	plasma membrane	35.15	36.79
PGSC0003DMT400058378	Potato	plasma membrane	35.15	36.6
AT4G15630.1	Thale cress	plasma membrane	34.16	36.32
Solyc01g067330.2.1	Tomato	plasma membrane	34.16	36.32
KRH11251	Soybean	plasma membrane	36.14	36.14
CDY09749	Canola	plasma membrane	33.66	35.79
AT4G15620.1	Thale cress	plasma membrane	33.66	35.79
TraesCS3A01G160200.1	Wheat	plasma membrane	27.23	35.26
Solyc09g074550.2.1	Tomato	extracellular	27.72	34.78
KRH68112	Soybean	plasma membrane	31.19	32.64
KRG96380	Soybean	plasma membrane	31.19	32.14
PGSC0003DMT400029522	Potato	plasma membrane	30.69	30.85
TraesCS5A01G049000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	28.71	29.59
TraesCS1A01G248700.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	24.75	26.45
TraesCS7A01G131000.1	Wheat	plasma membrane	18.81	23.46

Protein Annotations

EnsemblPlants:TraesCS7A01G384700.1	EnsemblPlantsGene:TraesCS7A01G384700	InterPro:CASP/CASPL	InterPro:CASP_dom	PANTHER:PTHR11615	PANTHER:PTHR11615:SF150
PFAM:PF04535	SEG:seg	TIGRFAMs:TIGR01569	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr7A:-:561174836..561177338

Molecular Weight (calculated)

21036.8 Da

IEP (calculated)

9.266

GRAVY (calculated)

0.736

Length

202 amino acids

Sequence
(BLAST)

001: MESRGKPGFS GAGSLSGSRR SYMGAAAAAA PSKPAVDGCG VALRVFILAA TLVAAVVMGL DRQTATVQVT IADTLPPLQV PVTAKWSYSS AFVYFVVANV
101: MACIFSAVAL AACRSRSAVV PLMVGDLVVQ ALLFSAVGAA AEFGILGERG NSHVRWGKVC HVYSSFCERA MAAVIVSLIA AFANLVHLMF AILDVHKNST
201: YY

Best Arabidopsis Sequence Match ( AT4G15630.1 )
(BLAST)

001: MEHESKNKVD GMEMEKGKKE SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVPIKLI PTLPPLNVST TAKASYLSAF VYNISANAIA CGYTAISIVI
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP

Arabidopsis Description

CASP-like protein 1E1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.