Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90578 | Canola | plasma membrane | 97.37 | 97.37 |
| CDY22743 | Canola | plasma membrane | 87.37 | 87.37 |
| AT4G15630.1 | Thale cress | plasma membrane | 85.79 | 85.79 |
| CDY09075 | Canola | plasma membrane | 85.26 | 85.26 |
| AT4G15620.1 | Thale cress | plasma membrane | 83.68 | 83.68 |
| VIT_05s0020g01820.t01 | Wine grape | cytosol, plasma membrane, vacuole | 51.05 | 49.74 |
| KRH02204 | Soybean | cytosol, plasma membrane, vacuole | 45.26 | 45.99 |
| KRH50920 | Soybean | cytosol, plasma membrane, vacuole | 45.26 | 45.74 |
| PGSC0003DMT400058378 | Potato | plasma membrane | 46.32 | 45.36 |
| Solyc01g067330.2.1 | Tomato | plasma membrane | 45.26 | 45.26 |
| GSMUA_Achr3P23880_001 | Banana | golgi, plasma membrane, vacuole | 46.32 | 44.67 |
| VIT_07s0104g01350.t01 | Wine grape | cytosol | 47.37 | 44.55 |
| KRH11251 | Soybean | plasma membrane | 46.32 | 43.56 |
| Solyc09g074550.2.1 | Tomato | extracellular | 33.16 | 39.13 |
| KRH68112 | Soybean | plasma membrane | 38.42 | 37.82 |
| KRG96380 | Soybean | plasma membrane | 38.42 | 37.24 |
| PGSC0003DMT400029522 | Potato | plasma membrane | 38.95 | 36.82 |
| TraesCS7D01G381200.1 | Wheat | plastid | 36.84 | 34.83 |
| GSMUA_Achr9P30940_001 | Banana | endoplasmic reticulum, plasma membrane | 34.21 | 34.57 |
| TraesCS7B01G287500.1 | Wheat | plastid | 35.79 | 34.34 |
| HORVU7Hr1G091440.2 | Barley | plastid | 35.79 | 34.0 |
| TraesCS7A01G384700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 35.79 | 33.66 |
| Zm00001d040807_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane, plastid | 36.84 | 31.82 |
| Os01t0363300-01 | Rice | golgi, plasma membrane, plastid | 35.79 | 31.63 |
| EES02949 | Sorghum | plastid | 36.84 | 31.53 |
| GSMUA_Achr1P14720_001 | Banana | vacuole | 29.47 | 29.02 |
| GSMUA_Achr5P00440_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 30.53 | 28.86 |
| CDX90580 | Canola | plasma membrane | 28.95 | 28.5 |
| CDY09750 | Canola | plasma membrane | 28.42 | 27.98 |
| CDY48566 | Canola | extracellular, plasma membrane | 23.68 | 27.44 |
| CDX89875 | Canola | extracellular, plasma membrane, vacuole | 23.16 | 26.83 |
| CDY21972 | Canola | extracellular, plasma membrane | 23.16 | 26.83 |
| CDY18177 | Canola | extracellular, plasma membrane, vacuole | 23.16 | 26.83 |
| CDY70062 | Canola | extracellular | 16.32 | 25.83 |
| CDY49020 | Canola | plasma membrane | 26.84 | 25.63 |
| CDY63706 | Canola | endoplasmic reticulum, plasma membrane, plastid | 26.32 | 25.25 |
| CDY49491 | Canola | plasma membrane | 26.32 | 25.13 |
| CDY14930 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.79 | 24.75 |
| CDX76458 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 25.79 | 24.62 |
| CDY31439 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 25.26 | 24.12 |
| CDY05260 | Canola | plasma membrane | 25.79 | 23.9 |
| CDX76993 | Canola | plasma membrane | 25.79 | 23.9 |
| CDY24696 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.26 | 23.41 |
| CDY11050 | Canola | cytosol | 16.32 | 22.46 |
| CDX92668 | Canola | extracellular, plasma membrane, vacuole | 20.0 | 22.35 |
| CDY03385 | Canola | plasma membrane | 19.47 | 21.89 |
| CDY08965 | Canola | extracellular, plasma membrane, vacuole | 13.16 | 21.19 |
| CDY34336 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 18.42 | 20.71 |
Protein Annotations
| EnsemblPlants:CDY09749 | EnsemblPlantsGene:GSBRNA2T00031441001 | GO:A0A078F9Q4 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:CASP/CASPL | InterPro:CASP_dom | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF150 |
| PFAM:PF04535 | ProteinID:CDY09749 | ProteinID:CDY09749.1 | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI0004EB5C59 |
| UniProt:A0A078F9Q4 | MapMan:35.1 | : | : | : | : |
Description
BnaC07g33120DCASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9Q4]
Coordinates
chrLK031998:-:788252..790384
Molecular Weight (calculated)
20146.7 Da
IEP (calculated)
10.483
GRAVY (calculated)
0.647
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQERKNNMN GMEIEKGKRE SGSRKVLELT MRVLALVLTM VAATVLGVAK QTKVVSIKLI PTLPPLDVST TAKASYLSAF VYNISANAIA CGYTAISIAV
101: LMICKGRRSK GLLMAVLIGD LVMVGLLFSG TGAAGAIGLM GSQGNKHVMW KKVCNVFGKF CHQAAASVAI TLLASIVFML LVVLDAMKLP
101: LMICKGRRSK GLLMAVLIGD LVMVGLLFSG TGAAGAIGLM GSQGNKHVMW KKVCNVFGKF CHQAAASVAI TLLASIVFML LVVLDAMKLP
001: MEHESKNKVD GMEMEKGKKE SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVPIKLI PTLPPLNVST TAKASYLSAF VYNISANAIA CGYTAISIVI
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP
Arabidopsis Description
CASP-like protein 1E1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.