Factsheet for GSMUA_Achr3P23880_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
plasma membrane 4
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	golgi
Plant-mPloc:	golgi, plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02204	Soybean	cytosol, plasma membrane, vacuole	48.73	51.34
KRH50920	Soybean	cytosol, plasma membrane, vacuole	47.72	50.0
Bra012775.1-P	Field mustard	plasma membrane	45.69	47.37
CDX90578	Canola	plasma membrane	45.69	47.37
CDY09749	Canola	plasma membrane	44.67	46.32
TraesCS7B01G287500.1	Wheat	plastid	46.19	45.96
TraesCS7D01G381200.1	Wheat	plastid	46.19	45.27
HORVU7Hr1G091440.2	Barley	plastid	45.69	45.0
AT4G15630.1	Thale cress	plasma membrane	42.64	44.21
TraesCS7A01G384700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	45.18	44.06
VIT_07s0104g01350.t01	Wine grape	cytosol	44.16	43.07
KRH11251	Soybean	plasma membrane	44.16	43.07
AT4G15620.1	Thale cress	plasma membrane	41.12	42.63
CDY22743	Canola	plasma membrane	41.12	42.63
CDY09075	Canola	plasma membrane	40.61	42.11
Bra038078.1-P	Field mustard	plasma membrane	41.12	41.97
Os01t0363300-01	Rice	golgi, plasma membrane, plastid	45.69	41.86
Zm00001d040807_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane, plastid	45.69	40.91
EES02949	Sorghum	plastid	45.69	40.54
Solyc01g067330.2.1	Tomato	plasma membrane	39.09	40.53
VIT_05s0020g01820.t01	Wine grape	cytosol, plasma membrane, vacuole	40.1	40.51
Solyc09g074550.2.1	Tomato	extracellular	32.99	40.37
PGSC0003DMT400058378	Potato	plasma membrane	39.09	39.69
KRH68112	Soybean	plasma membrane	37.56	38.34
GSMUA_Achr9P30940_001	Banana	endoplasmic reticulum, plasma membrane	36.55	38.3
KRG96380	Soybean	plasma membrane	38.07	38.27
GSMUA_Achr5P00440_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	36.55	35.82
GSMUA_Achr1P14720_001	Banana	vacuole	35.03	35.75
PGSC0003DMT400029522	Potato	plasma membrane	35.53	34.83
GSMUA_Achr5P00430_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	32.49	33.51
GSMUA_Achr9P30950_001	Banana	plasma membrane	31.47	29.95
GSMUA_Achr6P13870_001	Banana	extracellular, plasma membrane	23.86	29.38
GSMUA_Achr7P08030_001	Banana	plasma membrane	27.41	26.6
GSMUA_Achr3P03240_001	Banana	plasma membrane	25.89	26.02

Protein Annotations

EnsemblPlants:GSMUA_Achr3P23880_001	EnsemblPlants:GSMUA_Achr3T23880_001	EnsemblPlantsGene:GSMUA_Achr3G23880_001	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0016021	InterPro:CASP/CASPL	InterPro:CASP_dom	PANTHER:PTHR11615	PANTHER:PTHR11615:SF150
PFAM:PF04535	SEG:seg	TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI000294A93D	UniProt:M0SHA4
MapMan:35.1	:	:	:	:	:

Description

UPF0497 membrane protein 11 [Source:GMGC_GENE;Acc:GSMUA_Achr3G23880_001]

Coordinates

chr3:-:24575273..24576223

Molecular Weight (calculated)

20161.8 Da

IEP (calculated)

10.517

GRAVY (calculated)

0.761

Length

197 amino acids

Sequence
(BLAST)

001: MESTVKQGVN GGLRHATGDE GKTQAGAGLS AGILRLLVVA TTLVAALVMA TASETQTVSI EVAPTLPPLP VPVTAKASYS SAFVYFIVAN AIAFAYSAWS
101: LAVVVLKRRS TRGSILPISI LDAVMVGLLF SGNGAAAAFG VLGKYGNSHV GWTKVCNVFG RFCAQASASI VVSLIASVNL LALVILSMVG LHRRSSA

Best Arabidopsis Sequence Match ( AT4G15630.1 )
(BLAST)

001: MEHESKNKVD GMEMEKGKKE SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVPIKLI PTLPPLNVST TAKASYLSAF VYNISANAIA CGYTAISIVI
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP

Arabidopsis Description

CASP-like protein 1E1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.