Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- plasma membrane 4
- extracellular 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P00430_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 66.67 | 72.25 |
| VIT_05s0020g01830.t01 | Wine grape | cytosol | 56.52 | 56.25 |
| Os07t0442900-01 | Rice | plasma membrane | 53.62 | 53.62 |
| TraesCS1D01G248200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 48.79 | 53.44 |
| TraesCS1A01G248700.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 48.79 | 53.44 |
| EER98393 | Sorghum | endoplasmic reticulum, plasma membrane, plastid, vacuole | 51.69 | 53.23 |
| KRH02202 | Soybean | golgi, plasma membrane, vacuole | 49.28 | 52.85 |
| KRH50921 | Soybean | plasma membrane | 48.79 | 52.33 |
| Zm00001d005158_P001 | Maize | extracellular | 51.21 | 52.22 |
| Zm00001d019457_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 48.31 | 51.02 |
| TraesCS1B01G259400.1 | Wheat | plasma membrane | 46.38 | 50.79 |
| Solyc01g067300.2.1 | Tomato | cytosol | 47.83 | 50.51 |
| CDY09750 | Canola | plasma membrane | 46.86 | 50.26 |
| CDX90580 | Canola | plasma membrane | 46.38 | 49.74 |
| Bra012777.1-P | Field mustard | plasma membrane | 46.38 | 49.74 |
| PGSC0003DMT400058342 | Potato | cytosol | 44.93 | 47.21 |
| KRH21024 | Soybean | cytosol, plasma membrane, vacuole | 43.0 | 47.09 |
| HORVU1Hr1G062380.3 | Barley | plastid | 48.79 | 46.54 |
| AT4G15610.1 | Thale cress | plasma membrane | 43.0 | 46.11 |
| AT3G06390.1 | Thale cress | plasma membrane | 41.06 | 42.71 |
| CDY05260 | Canola | plasma membrane | 39.61 | 40.0 |
| CDX76993 | Canola | plasma membrane | 39.61 | 40.0 |
| CDY24696 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 39.13 | 39.51 |
| Bra020752.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 39.13 | 39.51 |
| GSMUA_Achr6P13870_001 | Banana | extracellular, plasma membrane | 27.05 | 35.0 |
| GSMUA_Achr3P23880_001 | Banana | golgi, plasma membrane, vacuole | 29.95 | 31.47 |
| GSMUA_Achr7P08030_001 | Banana | plasma membrane | 25.6 | 26.11 |
| GSMUA_Achr1P14720_001 | Banana | vacuole | 22.22 | 23.83 |
| GSMUA_Achr3P03240_001 | Banana | plasma membrane | 22.22 | 23.47 |
| GSMUA_Achr9P30940_001 | Banana | endoplasmic reticulum, plasma membrane | 21.26 | 23.4 |
| GSMUA_Achr5P00440_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 21.26 | 21.89 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P30950_001 | EnsemblPlants:GSMUA_Achr9T30950_001 | EnsemblPlantsGene:GSMUA_Achr9G30950_001 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:CASP/CASPL | InterPro:CASP_dom | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF150 |
| PFAM:PF04535 | SEG:seg | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI000295C2A0 | UniProt:M0U502 |
| MapMan:35.1 | : | : | : | : | : |
Description
UPF0497 membrane protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G30950_001]
Coordinates
chr9:+:34029908..34031500
Molecular Weight (calculated)
22092.1 Da
IEP (calculated)
10.195
GRAVY (calculated)
0.565
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTETSTTS TTNDFSGSKT APEYGYAVPS RPPPNLFFLD FGLRLLLFAS AVTALVVMVT SKQTKLISVT VAPSSQILVS RDAKFQHSPA FIYLVAALSV
101: TGLYSIITML VSLFSIASPS PSPKTLFLLI LFDTLMAGVM ASATGNAGSV AYIGLKGNSH VNWNKICNMY GKFCRHVGSS TAVSLIASIV LVLLVVLSSY
201: SLYRRSR
101: TGLYSIITML VSLFSIASPS PSPKTLFLLI LFDTLMAGVM ASATGNAGSV AYIGLKGNSH VNWNKICNMY GKFCRHVGSS TAVSLIASIV LVLLVVLSSY
201: SLYRRSR
001: MGYETKSTLD TERSTAPGTG TTTKSCSMTQ VVLRFVLFAA TLTSIVVMVT SKQTKNIFLP GTPIRIPAAE FTNSPALIYF VVALSVACFY SIVSTFVTVS
101: AFKKHSCSAV LLLNLAIMDA VMVGIVASAT GAGGGVAYLG LKGNKEVRWG KICHIYDKFC RHVGGAIAVS LFASVVLLLL SIISVLSLYK KIR
101: AFKKHSCSAV LLLNLAIMDA VMVGIVASAT GAGGGVAYLG LKGNKEVRWG KICHIYDKFC RHVGGAIAVS LFASVVLLLL SIISVLSLYK KIR
Arabidopsis Description
CASP-like protein 1D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE29]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.